RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 CSPG4P5Q96PW8 444 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 PPP1R16BQ96T49 567 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 TUBA1CQ9BQE3 449 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 ING2Q9H160 280 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 ADAMTS10Q9H324 1103 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 GDAP2Q9NXN4 497 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 GNPTGQ9UJJ9 305 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 HES2Q9Y543 173 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 CCDC162PA2VCL2 907 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 A8MUA0 341 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 TCP10L2B9ZVM9 353 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 H0Y858 1186 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 M0R3G1 203 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 VWA5AO00534 786 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 LZTS3O60299 673 aaPredicted RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 ERVK-10P10266 1014 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 TTKP33981 857 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 KRT20P35900 424 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 GRM5P41594 1212 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 ST13P50502 369 aaKnown RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 STX1BP61266 288 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 TRPC3Q13507 836 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 BAATQ14032 418 aaPredicted RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 TSTD2Q5T7W7 516 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 KCTD11Q693B1 232 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 SPRED1Q7Z699 444 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 HERC6Q8IVU3 1022 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 TERB1Q8NA31 727 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 PGBD4Q96DM1 585 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 TRIT1Q9H3H1 467 aaKnown RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 CACNA2D2Q9NY47 1150 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 MAT2BQ9NZL9 334 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 TMEM9Q9P0T7 183 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 GMIPQ9P107 970 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 KLQ9UEF7 1012 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 PHIPQ8WWQ0 1821 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 PRR23AA6NEV1 266 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 F5H423 210 aaPredicted RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 SDHDO14521 159 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 ACOX3O15254 700 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 C2P06681 752 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 CKMT2P17540 419 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 CCNA2P20248 432 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 SPRP35270 261 aaPredicted RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 GARSP41250 739 aaKnown RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 PSME3P61289 254 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 SLC27A3Q5K4L6 730 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 ERMP1Q7Z2K6 904 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 IGFN1Q86VF2 1251 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 TTC16Q8NEE8 873 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 ACVR1CQ8NER5 493 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 ADAM32Q8TC27 787 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 URGCPQ8TCY9 931 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 KCTD15Q96SI1 283 aaPredicted RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 NPAS2Q99743 824 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 REXO4Q9GZR2 422 aaKnown RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 TOR4AQ9NXH8 423 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 RCOR3Q9P2K3 495 aaPredicted RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 CNOT6Q9ULM6 557 aaKnown RBP8.6□□□□□ -1.03
MARK3-210ENST00000556463 ANKRD6Q9Y2G4 727 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 IPPQ9Y573 584 aa8.6□□□□□ -1.03
MARK3-210ENST00000556463 A0A096LPK6 155 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 M0QYV0 167 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 SNAP91O60641 907 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 CD19P15391 556 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 JUNBP17275 347 aaPredicted RBP8.59□□□□□ -1.03
MARK3-210ENST00000556463 TFE3P19532 575 aaPredicted RBP8.59□□□□□ -1.03
MARK3-210ENST00000556463 CCR10P46092 362 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 GRIA4P48058 902 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 SLC9A3P48764 834 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 SERPINH1P50454 418 aaKnown RBP8.59□□□□□ -1.03
MARK3-210ENST00000556463 TBX4P57082 545 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 PMS2P3Q13401 168 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 HSDL1Q3SXM5 330 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.59□□□□□ -1.03
MARK3-210ENST00000556463 ZCCHC8Q6NZY4 707 aaKnown RBP8.59□□□□□ -1.03
MARK3-210ENST00000556463 MAMSTRQ6ZN01 415 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 NECAB2Q7Z6G3 386 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 TRUB1Q8WWH5 349 aaKnown RBP8.59□□□□□ -1.03
MARK3-210ENST00000556463 ZUFSPQ96AP4 578 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 C8orf48Q96LL4 319 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 ZNF641Q96N77 438 aaPredicted RBP8.59□□□□□ -1.03
MARK3-210ENST00000556463 GPR22Q99680 433 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 FZD8Q9H461 694 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 MAGEE1Q9HCI5 957 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 SLC35C2Q9NQQ7 365 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 ZNF302Q9NR11 478 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 CCM2LQ9NUG4 571 aaPredicted RBP8.59□□□□□ -1.03
MARK3-210ENST00000556463 NDFIP2Q9NV92 336 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 RIC8BQ9NVN3 520 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 SMOXQ9NWM0 555 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 RWDD3Q9Y3V2 267 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 PLXNA1Q9UIW2 1896 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 ZBTB42B2RXF5 422 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 HOXA2O43364 376 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 NPHS1O60500 1241 aa8.59□□□□□ -1.03
MARK3-210ENST00000556463 POLBP06746 335 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms