RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 PSMG2Q969U7 264 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 HHIPL1Q96JK4 782 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 TUBB1Q9H4B7 451 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 WDR41Q9HAD4 459 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 OLA1Q9NTK5 396 aaKnown RBP12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 NLE1Q9NVX2 485 aaPredicted RBP12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 GMIPQ9P107 970 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 SLC4A7Q9Y6M7 1214 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 GJB3O75712 270 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 CD160O95971 181 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 CTSHP09668 335 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 OR4Q2P0C623 313 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 RWDD4Q6NW29 188 aaKnown RBP12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 TTC9BQ8N6N2 239 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 OR52K2Q8NGK3 314 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 C3orf30Q96M34 536 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 ZFYVE28Q9HCC9 887 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 ACSS2Q9NR19 701 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 ARMC1Q9NVT9 282 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 MAP10Q9P2G4 905 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 SCOCQ9UIL1 159 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 PCDHGB4Q9UN71 923 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 PCDHGB5Q9Y5G0 923 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 TLL2Q9Y6L7 1015 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 NEMP2A6NFY4 417 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 H3BMM5 538 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 H7C0S8 307 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 FXYD1O00168 92 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 DLGAP1O14490 977 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 ARSAP15289 507 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 ZNF37AP17032 561 aaPredicted RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 GLRBP48167 497 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 KPNA2P52292 529 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 TBX4P57082 545 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 AGAP9Q5VTM2 703 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 OGFOD2Q6N063 350 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 CHERPQ8IWX8 916 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 TSPAN17Q96FV3 270 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 DCUN1D1Q96GG9 259 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 ELMO2Q96JJ3 720 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 PRICKLE1Q96MT3 831 aaPredicted RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 BIRC8Q96P09 236 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 SPATA16Q9BXB7 569 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 TFB2MQ9H5Q4 396 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 INTS10Q9NVR2 710 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 OAS3Q9Y6K5 1087 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 GOLGA8QA0A0J9YX86 632 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 LOC100653049A0A140TA62 436 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 GOLGA8OA6NCC3 632 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 GOLGA8NF8WBI6 632 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 TRIM38O00635 465 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 KRT34O76011 436 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 CD86P42081 329 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 SH3BP2P78314 561 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 TXNL4AP83876 142 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 FAM83EQ2M2I3 478 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 REP15Q6BDI9 236 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 HMBOX1Q6NT76 420 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 DCP1BQ8IZD4 617 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 MICAL1Q8TDZ2 1067 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 C2orf15Q8WU43 125 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 VCX3BQ9H321 246 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 EFCAB1Q9HAE3 211 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 TRMT13Q9NUP7 481 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 DNMT3BQ9UBC3 853 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 INPP5FQ9Y2H2 1132 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 PLXNA2O75051 1894 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 OR6C75A6NL08 312 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 RPS17P08708 135 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 HLA-DPA1P20036 260 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 NUDT2P50583 147 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 SMARCB1Q12824 385 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 OR4D1Q15615 310 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 ZRSR2Q15696 482 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 NFE2Q16621 373 aaPredicted RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 PPP1R3AQ16821 1122 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 TCTN1Q2MV58 587 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 PAN2Q504Q3 1202 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 BORAQ6PGQ7 559 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 SPATA6LQ8N4H0 392 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 BRSK1Q8TDC3 778 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 OVCA2Q8WZ82 227 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 ISG20Q96AZ6 181 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 CATSPER2Q96P56 530 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 CDRT15Q96T59 188 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 TTC1Q99614 292 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 VCXQ9H320 206 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 ZNF225Q9UK10 706 aa12.63□□□□□ -0.39
PPP4R3A-206ENST00000554943 TNPO2O14787 897 aaKnown RBP12.62□□□□□ -0.39
PPP4R3A-206ENST00000554943 FGF1P05230 155 aa12.62□□□□□ -0.39
PPP4R3A-206ENST00000554943 SLC6A4P31645 630 aa12.62□□□□□ -0.39
PPP4R3A-206ENST00000554943 GRIK1P39086 918 aa12.62□□□□□ -0.39
PPP4R3A-206ENST00000554943 STC1P52823 247 aa12.62□□□□□ -0.39
PPP4R3A-206ENST00000554943 RHDQ02161 417 aa12.62□□□□□ -0.39
PPP4R3A-206ENST00000554943 GRIK2Q13002 908 aa12.62□□□□□ -0.39
PPP4R3A-206ENST00000554943 GPR17Q13304 367 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms