RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SLC4A1P02730 911 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 DNTTP04053 509 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 INHBAP08476 426 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 HOXB2P14652 356 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ITGB7P26010 798 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 NMBRP28336 390 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ATP5DP30049 168 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 HNF1BP35680 557 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 MSH2P43246 934 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ELP6Q0PNE2 266 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 KRT71Q3SY84 523 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ZDHHC20Q5W0Z9 365 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF776Q68DI1 518 aaPredicted RBP10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 KIAA0930Q6ICG6 404 aaPredicted RBP10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ESRP1Q6NXG1 681 aaKnown RBP10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 CES3Q6UWW8 571 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 TAOK1Q7L7X3 1001 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 SDCCAG8Q86SQ7 713 aaPredicted RBP10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 LRRC6Q86X45 466 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 MMAAQ8IVH4 418 aaKnown RBP10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 LMNTD2Q8IXW0 634 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 PPM1NQ8N819 430 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 IL17RCQ8NAC3 791 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 TXNDC5Q8NBS9 432 aaKnown RBP10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 OR6P1Q8NGX9 317 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 OR2T3Q8NH03 318 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 GANCQ8TET4 914 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 RAB7BQ96AH8 199 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 MFSD3Q96ES6 412 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 CERS2Q96G23 380 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 GABRG3Q99928 467 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 TMEM109Q9BVC6 243 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 RSPH9Q9H1X1 276 aaPredicted RBP10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 EPB41L4BQ9H329 900 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ACSS3Q9H6R3 686 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ZDHHC4Q9NPG8 344 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 RAD18Q9NS91 495 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF446Q9NWS9 450 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 MOCS1Q9NZB8 636 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 VPS18Q9P253 973 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 FETUBQ9UGM5 382 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 SLC24A2Q9UI40 661 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 RABGEF1Q9UJ41 708 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF711Q9Y462 761 aa10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 KIF26AQ9ULI4 1882 aaPredicted RBP10.49□□□□□ -0.73
TMEM55B-205ENST00000554028 COL6A3P12111 3177 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 NEMP1O14524 444 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 SLC7A4O43246 635 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 LDB2O43679 373 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 TCEA3O75764 348 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 RPP40O75818 363 aaKnown RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 VAPBO95292 243 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 CTSLP07711 333 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 ALPIP09923 528 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 TIMP2P16035 220 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF30P17039 623 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 C5AR1P21730 350 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 CD72P21854 359 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 VIPR1P32241 457 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 HMGCLP35914 325 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 PSMD8P48556 350 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 NEK3P51956 506 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 PTPN5P54829 565 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 ILF2Q12905 390 aaKnown RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 MSLNQ13421 630 aaPredicted RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 CCINQ13939 588 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 UBXN2BQ14CS0 331 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 CST6Q15828 149 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 CNGA3Q16281 694 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 POM121L1PQ3SYA9 428 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 ERN2Q76MJ5 926 aaKnown RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 MTERF4Q7Z6M4 381 aaKnown RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 KCNMB4Q86W47 210 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 RASSF3Q86WH2 238 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 GJD3Q8N144 294 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 RIBC1Q8N443 379 aaPredicted RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 OTUD6BQ8N6M0 293 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 MDGA1Q8NFP4 955 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 OR4K2Q8NGD2 314 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 OR2W6PQ8NHA6 318 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 RPLP0P6Q8NHW5 317 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 EZH1Q92800 747 aaPredicted RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 PBXIP1Q96AQ6 731 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 FCRL3Q96P31 734 aaPredicted RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 MCCC1Q96RQ3 725 aaPredicted RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 LYSMD1Q96S90 227 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 TTC1Q99614 292 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 OMDQ99983 421 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 C19orf43Q9BQ61 176 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 WDR83Q9BRX9 315 aaKnown RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 FAM167BQ9BTA0 163 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 HDAC8Q9BY41 377 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 CENPHQ9H3R5 247 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 LMAN1LQ9HAT1 526 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 POLMQ9NP87 494 aaPredicted RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 TREX1Q9NSU2 369 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 NLE1Q9NVX2 485 aaPredicted RBP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 BCCIPQ9P287 314 aaKnown RBP eCLIP10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 HCN2Q9UL51 889 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 SCML1Q9UN30 329 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms