RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ENPP2Q13822 863 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 CCDC6Q16204 474 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 FAM153CQ494X1 144 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 PCID2Q5JVF3 399 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 PLA2G2CQ5R387 149 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 BEND6Q5SZJ8 279 aaPredicted RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 FAM46CQ5VWP2 391 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 DENND2CQ68D51 928 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 CASC4Q6P4E1 433 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 FBXO38Q6PIJ6 1188 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 GDPD4Q6W3E5 623 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 DPY19L3Q6ZPD9 716 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 WDR5BQ86VZ2 330 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 GSPT2Q8IYD1 628 aaKnown RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 ZBED8Q8IZ13 594 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 CHPFQ8IZ52 775 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 SYNPOQ8N3V7 929 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 TMIEQ8NEW7 156 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 SORCS1Q8WY21 1168 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 ZCCHC14Q8WYQ9 949 aaKnown RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 GATA6Q92908 595 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 PEX13Q92968 403 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 STAMBPL1Q96FJ0 436 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 PPP1R16AQ96I34 528 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 TRIB3Q96RU7 358 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 RANBP9Q96S59 729 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 EBNA1BP2Q99848 306 aaKnown RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 C19orf43Q9BQ61 176 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 CCDC77Q9BR77 488 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 TMEM245Q9H330 911 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 PABPC3Q9H361 631 aaKnown RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 SUV39H2Q9H5I1 410 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 ZDHHC6Q9H6R6 413 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 MRM3Q9HC36 420 aaKnown RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 DKK3Q9UBP4 350 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 IL36AQ9UHA7 158 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 PHTF1Q9UMS5 762 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 PCDHGC4Q9Y5F7 938 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 MAD1L1Q9Y6D9 718 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 TEX264Q9Y6I9 313 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 STON1Q9Y6Q2 735 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 COL4A2P08572 1712 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 FAM237BA0A1B0GVD1 139 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 ANKRD66B4E2M5 251 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 K7EQS6 105 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 USP12O75317 370 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 EPHX1P07099 455 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 PAMP19021 973 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 XPAP23025 273 aaPredicted RBP9.56□□□□□ -0.88
YBX3-215ENST00000544504 KIR2DL1P43626 348 aaPredicted RBP9.56□□□□□ -0.88
YBX3-215ENST00000544504 EIF3BP55884 814 aaKnown RBP9.56□□□□□ -0.88
YBX3-215ENST00000544504 ILF2Q12905 390 aaKnown RBP9.56□□□□□ -0.88
YBX3-215ENST00000544504 TRAF2Q12933 501 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 SPARCL1Q14515 664 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 PON2Q15165 354 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 SIRPB2Q5JXA9 342 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 SPANXN3Q5MJ09 141 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 EOGTQ5NDL2 527 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 FNBP1LQ5T0N5 605 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 SYCP2LQ5T4T6 812 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 ALS2CLQ60I27 953 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 EGFLAMQ63HQ2 1017 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 DENND5AQ6IQ26 1287 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 FSTL4Q6MZW2 842 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 ZNF449Q6P9G9 518 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 USP45Q70EL2 814 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 ZNF534Q76KX8 674 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 SLC25A41Q8N5S1 370 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 FBXO36Q8NEA4 188 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 BRSK1Q8TDC3 778 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 PDCD6IPQ8WUM4 868 aaKnown RBP9.56□□□□□ -0.88
YBX3-215ENST00000544504 UBLCP1Q8WVY7 318 aaPredicted RBP9.56□□□□□ -0.88
YBX3-215ENST00000544504 GAB3Q8WWW8 586 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 PTPRN2Q92932 1015 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 ECHDC3Q96DC8 303 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 SIGLEC10Q96LC7 697 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 RUFY1Q96T51 708 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 TXLNGYQ9BZA5 131 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 CDC42EP4Q9H3Q1 356 aaKnown RBP9.56□□□□□ -0.88
YBX3-215ENST00000544504 VIPAS39Q9H9C1 493 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 PPCSQ9HAB8 311 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 DYRK4Q9NR20 520 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 ZC3H7BQ9UGR2 993 aaKnown RBP9.56□□□□□ -0.88
YBX3-215ENST00000544504 RIMKLBQ9ULI2 386 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 CHKBQ9Y259 395 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 PCDHB9Q9Y5E1 797 aa9.56□□□□□ -0.88
YBX3-215ENST00000544504 A0A087WUV0 522 aaPredicted RBP9.55□□□□□ -0.88
YBX3-215ENST00000544504 CCDC163A0A0D9SF12 145 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 TSPAN11A1L157 253 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 C2orf81A6NN90 581 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 FZD6O60353 706 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 SIN3BO75182 1162 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 RPP40O75818 363 aaKnown RBP9.55□□□□□ -0.88
YBX3-215ENST00000544504 USP1O94782 785 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 ADH1BP00325 375 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 UGT2B4P06133 528 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 IVLP07476 585 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 ATXN1LP0C7T5 689 aaKnown RBP9.55□□□□□ -0.88
YBX3-215ENST00000544504 CYP2A6P11509 494 aaPredicted RBP9.55□□□□□ -0.88
YBX3-215ENST00000544504 SPINK2P20155 84 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms