RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 A0A0U1RQS6 177 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 UBXN8O00124 270 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 SNAI1O95863 264 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 PCNAP12004 261 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 ELK4P28324 431 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 HSPA13P48723 471 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 CLCNKBP51801 687 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 STX5Q13190 355 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 SQLEQ14534 574 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 UBXN11Q5T124 520 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 SDHAF4Q5VUM1 108 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 TWF2Q6IBS0 349 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 LYSMD3Q7Z3D4 306 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 SNX29P2Q8IUI4 249 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 LZTR1Q8N653 840 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 MAGEE2Q8TD90 523 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 C19orf60Q96EN9 201 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 SENP8Q96LD8 212 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 ANKRD60Q9BZ19 345 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 MEAF6Q9HAF1 191 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 GLOD4Q9HC38 313 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 BCAP29Q9UHQ4 241 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 DNAJC15Q9Y5T4 150 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 TNS1Q9HBL0 1735 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 TANC1Q9C0D5 1861 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 DHRS12A0PJE2 317 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 FXYD1O00168 92 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 GIPC1O14908 333 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 DYNC1LI2O43237 492 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 BAIAP3O94812 1187 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 COL6A2P12110 1019 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZNF182P17025 639 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PRDX3P30048 256 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PRKAA2P54646 552 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PFKFB4Q16877 469 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PDZD4Q76G19 769 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZNF354CQ86Y25 554 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC15A3Q8IY34 581 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 MPHOSPH6Q99547 160 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 C1orf50Q9BV19 199 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 MID1IP1Q9NPA3 183 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 TMLHEQ9NVH6 421 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 THEGQ9P2T0 379 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 NEU3Q9UQ49 428 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PDCD11Q14690 1871 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLCO1B7G3V0H7 640 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 NPHS1O60500 1241 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 MAFKO60675 156 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 MMP3P08254 477 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 DARSP14868 501 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 GPX3P22352 226 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 WNT3AP56704 352 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 GNA12Q03113 381 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 RAB39AQ14964 217 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 ACBD5Q5T8D3 534 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 HECTD2Q5U5R9 776 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 ERMP1Q7Z2K6 904 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 GPR180Q86V85 440 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PARP8Q8N3A8 854 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 C2CD4AQ8NCU7 369 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 OR6J1Q8NGC5 347 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 DQX1Q8TE96 717 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 TRPC4APQ8TEL6 797 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 TANKQ92844 425 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PBXIP1Q96AQ6 731 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZNF560Q96MR9 790 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 GAD1Q99259 594 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 DNAI2Q9GZS0 605 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 TUBB1Q9H4B7 451 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 CXorf21Q9HAI6 301 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 NT5MQ9NPB1 228 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 MIOSQ9NXC5 875 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 GDAP2Q9NXN4 497 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 TRHDEQ9UKU6 1024 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 ACTL7AQ9Y615 435 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PDE4DIPQ5VU43 2346 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 MAGEB16A2A368 324 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 H3BMQ9 156 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 J3KR12 359 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 AXIN1O15169 862 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 MAN1A2O60476 641 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC25A27O95847 323 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 SMIM10L2AP0DMW4 78 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 SMIM10L2BP0DMW5 78 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 CD86P42081 329 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 IST1P53990 364 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PFKPQ01813 784 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 DSC2Q02487 901 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 SNX17Q15036 470 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 CYP51A1Q16850 503 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 UNC50Q53HI1 259 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 TMEM214Q6NUQ4 689 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 LARP4Q71RC2 724 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 CIR1Q86X95 450 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 HDAC10Q969S8 669 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 PABPC5Q96DU9 382 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 COG8Q96MW5 612 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 TCF12Q99081 682 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 NPLQ9BXD5 320 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms