RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 HCAR2Q8TDS4 363 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FBF1Q8TES7 1133 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 STYXQ8WUJ0 223 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TADA1Q96BN2 335 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZBTB9Q96C00 473 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RANBP9Q96S59 729 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CYTH2Q99418 400 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TTC1Q99614 292 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZFYVE1Q9HBF4 777 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MAGEE1Q9HCI5 957 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LRRC4CQ9HCJ2 640 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZNF711Q9Y462 761 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 UNC80Q8N2C7 3258 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 C5orf42Q9H799 3197 aa10.7□□□□□ -0.7
TNFRSF1A-211ENST00000538363 A0A0J9YYE9 177 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KANSL1LA0AUZ9 987 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 GOLGA8CPA6NN73 597 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TP73O15350 636 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ATP8B1O43520 1251 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LZTS3O60299 673 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RNASEH2AO75792 299 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 USP1O94782 785 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 VAPBO95292 243 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TRBC1P01850 177 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 INHBAP08476 426 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ATXN1LP0C7T5 689 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 C5AR1P21730 350 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ITGB7P26010 798 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NMBRP28336 390 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PMLP29590 882 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 VIPR1P32241 457 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HNF1BP35680 557 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PPARGP37231 505 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HADHAP40939 763 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KIR2DL1P43626 348 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SUOXP51687 545 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NEK3P51956 506 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MGAT5Q09328 741 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ACOX1Q15067 660 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SMAD1Q15797 465 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CST6Q15828 149 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 UGP2Q16851 508 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KRT71Q3SY84 523 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LRRC73Q5JTD7 316 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ARMC3Q5W041 872 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PDPK2PQ6A1A2 396 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 DENND5AQ6IQ26 1287 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 UNC5AQ6ZN44 842 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ERN2Q76MJ5 926 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TAS2R42Q7RTR8 314 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SDCCAG8Q86SQ7 713 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KLHDC8BQ8IXV7 354 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SYNPOQ8N3V7 929 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HDDC3Q8N4P3 179 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PPM1NQ8N819 430 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 IL17RCQ8NAC3 791 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CALML6Q8TD86 181 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CXorf40AQ8TE69 158 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PIH1D2Q8WWB5 315 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SIPA1Q96FS4 1042 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NECAB3Q96P71 396 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TRIB3Q96RU7 358 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MRM3Q9HC36 420 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 BPIFA1Q9NP55 256 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RAD18Q9NS91 495 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PKD2L2Q9NZM6 624 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZFATQ9P243 1243 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 DKK3Q9UBP4 350 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MUTYHQ9UIF7 546 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ARL5AQ9Y689 179 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SLC30A1Q9Y6M5 507 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 WASF2Q9Y6W5 498 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PRUNE2Q8WUY3 3088 aa10.69□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TCRBV21S2A2A0A5A6 115 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CAPN8A6NHC0 703 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TRAFD1O14545 582 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RASGRF2O14827 1237 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RPP40O75818 363 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PCDH8O95206 1070 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CLDN7O95471 211 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PRLP01236 227 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CTSLP07711 333 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ABHD2P08910 425 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 BMP1P13497 986 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TIMP2P16035 220 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ATP5DP30049 168 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MAGEA3P43357 314 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SATB1Q01826 763 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SEMG2Q02383 582 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CAMK2GQ13555 558 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CRYMQ14894 314 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CNGA3Q16281 694 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FASTKD1Q53R41 847 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZRANB3Q5FWF4 1079 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ESRP1Q6NXG1 681 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LRIG3Q6UXM1 1119 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LYSMD3Q7Z3D4 306 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KCNMB4Q86W47 210 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TMPRSS6Q8IU80 811 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms