RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 RFC2P35250 354 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 AP3M2P53677 418 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 SMU1Q2TAY7 513 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 COLEC12Q5KU26 742 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 FAM45BPQ6NSW5 357 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 PIWIL4Q7Z3Z4 852 aaKnown RBP12.53□□□□□ -0.4
TSKU-203ENST00000527881 PSD4Q8NDX1 1056 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 FAM45AQ8TCE6 357 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 ZUFSPQ96AP4 578 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 DUS3LQ96G46 650 aaKnown RBP12.53□□□□□ -0.4
TSKU-203ENST00000527881 PCDHGA11Q9Y5H2 935 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 TRIM64A6NGJ6 449 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 ACOX3O15254 700 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 BBOX1O75936 387 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 THRBP10828 461 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 CXCR2P25025 360 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 PSMD8P48556 350 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 ATP6V0D1P61421 351 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 RACK1P63244 317 aaKnown RBP12.53□□□□□ -0.4
TSKU-203ENST00000527881 CCNA1P78396 465 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 BNIP2Q12982 314 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 CSHL1Q14406 222 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 GTF2IRD2BQ6EKJ0 949 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 TBPL2Q6SJ96 375 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 SPRED1Q7Z699 444 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 CLEC14AQ86T13 490 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 GTF2IRD2Q86UP8 949 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 RALGPS2Q86X27 583 aaPredicted RBP12.53□□□□□ -0.4
TSKU-203ENST00000527881 MCFD2Q8NI22 146 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 HMGCLL1Q8TB92 370 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 ATL1Q8WXF7 558 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 ELMO2Q96JJ3 720 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 DNAI2Q9GZS0 605 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 PDZD7Q9H5P4 517 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 EML4Q9HC35 981 aaKnown RBP12.53□□□□□ -0.4
TSKU-203ENST00000527881 LTB4R2Q9NPC1 389 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 GIMAP2Q9UG22 337 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 NUDT5Q9UKK9 219 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 TESMINQ9Y4I5 508 aa12.53□□□□□ -0.4
TSKU-203ENST00000527881 TRIM64BA6NI03 449 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 CENPBD1B2RD01 187 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 TCP10L2B9ZVM9 353 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 UGT2B11O75310 529 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 GPIP06744 558 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 CRHBPP24387 322 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 ALDH7A1P49419 539 aaKnown RBP12.52□□□□□ -0.4
TSKU-203ENST00000527881 MCCD1P59942 119 aaPredicted RBP12.52□□□□□ -0.4
TSKU-203ENST00000527881 NFYCQ13952 458 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 SNAP47Q5SQN1 464 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 NIPA1Q7RTP0 329 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 RETREG3Q86VR2 466 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 TBC1D21Q8IYX1 336 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 TXNDC5Q8NBS9 432 aaKnown RBP12.52□□□□□ -0.4
TSKU-203ENST00000527881 SYTL5Q8TDW5 730 aaPredicted RBP12.52□□□□□ -0.4
TSKU-203ENST00000527881 STYXQ8WUJ0 223 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 PROX1Q92786 737 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 TMEM176AQ96HP8 235 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 TXNDC15Q96J42 360 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 CPNE5Q9HCH3 593 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 INTS10Q9NVR2 710 aaKnown RBP12.52□□□□□ -0.4
TSKU-203ENST00000527881 ADPRHL2Q9NX46 363 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 ACTR3BQ9P1U1 418 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 RABL2BQ9UNT1 228 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 NDUFAF1Q9Y375 327 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 PCDHB3Q9Y5E6 796 aa12.52□□□□□ -0.4
TSKU-203ENST00000527881 FAM172BPA6NC97 362 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 ICMTO60725 284 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 ATG7O95352 703 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 STMN1P16949 149 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 JUNBP17275 347 aaPredicted RBP12.52□□□□□ -0.41
TSKU-203ENST00000527881 CASP3P42574 277 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 NR2C2P49116 596 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 DESI1Q6ICB0 168 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 FAM160B2Q86V87 743 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 DCP2Q8IU60 420 aaKnown RBP12.52□□□□□ -0.41
TSKU-203ENST00000527881 GALNT13Q8IUC8 556 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 SPNS2Q8IVW8 549 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 MICU2Q8IYU8 434 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 PYROXD2Q8N2H3 581 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 SMG8Q8ND04 991 aaKnown RBP12.52□□□□□ -0.41
TSKU-203ENST00000527881 CSPG4P5Q96PW8 444 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 DPP3Q9NY33 737 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 SNTG2Q9NY99 539 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 DSEQ9UL01 958 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 ANKRD6Q9Y2G4 727 aa12.52□□□□□ -0.41
TSKU-203ENST00000527881 TNRC6CQ9HCJ0 1690 aaKnown RBP12.52□□□□□ -0.41
TSKU-203ENST00000527881 KMOO15229 486 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 SUPT7LO94864 414 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 APOA1P02647 267 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 PRKACBP22694 351 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 CES1P23141 567 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 GTF2E2P29084 291 aaKnown RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 CLK1P49759 484 aaKnown RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 NCS1P62166 190 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 CTBP1Q13363 440 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 PGM5Q15124 567 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 ZFP69Q49AA0 526 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 RABL3Q5HYI8 236 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 TRAF7Q6Q0C0 670 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms