RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ZNF300Q96RE9 604 aaPredicted RBP13.6□□□□□ -0.23
PABPC1-208ENST00000519004 FBXL12Q9NXK8 326 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 NUDT5Q9UKK9 219 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 DSEQ9UL01 958 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 PDE10AQ9Y233 779 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 NRAPQ86VF7 1730 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 TMEM150BA6NC51 233 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 A8MV72 311 aaPredicted RBP13.6□□□□□ -0.23
PABPC1-208ENST00000519004 RIMBP2O15034 1052 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 CAPN1P07384 714 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 ERVK-10P10266 1014 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 ATP2B4P23634 1241 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 IL32P24001 234 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 GTF2E2P29084 291 aaKnown RBP13.6□□□□□ -0.23
PABPC1-208ENST00000519004 CDH6P55285 790 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 OR2B6P58173 313 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 NCS1P62166 190 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 UBXN2AP68543 259 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 TARDBPQ13148 414 aaKnown RBP eCLIP13.6□□□□□ -0.234e-13■■■■□ 24.9
PABPC1-208ENST00000519004 TFDP2Q14188 446 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 C6orf141Q5SZD1 244 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 GRTP1Q5TC63 336 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 ERAP2Q6P179 960 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 NLGN4XQ8N0W4 816 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 TMEM151AQ8N4L1 468 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 AFG1LQ8WV93 481 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 FAR1Q8WVX9 515 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 SDCCAG3Q96C92 435 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 NXNL1Q96CM4 212 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 LRCH3Q96II8 777 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 TEKT3Q9BXF9 490 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 ACE2Q9BYF1 805 aaPredicted RBP13.6□□□□□ -0.23
PABPC1-208ENST00000519004 CAB39LQ9H9S4 337 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 ACOXLQ9NUZ1 547 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 ADAM28Q9UKQ2 775 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 USP18Q9UMW8 372 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 COL5A2P05997 1499 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 GREB1LQ9C091 1923 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 PABPN1LA6NDY0 278 aaKnown RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 OR5K3A6NET4 321 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 ZBBXA8MT70 800 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 DDX39AO00148 427 aaKnown RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 SSX4O60224 188 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 ARHGEF15O94989 841 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 CD4P01730 458 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 GPIP06744 558 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 IL4RP24394 825 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 IL12AP29459 219 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 FMO4P31512 558 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 SHMT1P34896 483 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 PTPN20Q4JDL3 420 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 ZNF484Q5JVG2 852 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 LAIR2Q6ISS4 152 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 CDR2LQ86X02 465 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 CLYBLQ8N0X4 340 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 CCDC185Q8N715 623 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 GALNT6Q8NCL4 622 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 ARNTL2Q8WYA1 636 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 PIK3R3Q92569 461 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 OMA1Q96E52 524 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 YIPF6Q96EC8 236 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 SLC39A13Q96H72 371 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 ELMO2Q96JJ3 720 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 SLC25A23Q9BV35 468 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 MRPL9Q9BYD2 267 aaKnown RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 DNAI2Q9GZS0 605 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 PAK1IP1Q9NWT1 392 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 ACTR3BQ9P1U1 418 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 ABCD2Q9UBJ2 740 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 RWDD3Q9Y3V2 267 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 PCDHB3Q9Y5E6 796 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 SNX5Q9Y5X3 404 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 GAS2O43903 313 aaKnown RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 TNNI1P19237 187 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 ACVR2AP27037 513 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 CDH5P33151 784 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 GALNT3Q14435 633 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 MEP1AQ16819 746 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 CTU2Q2VPK5 515 aaKnown RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 SPPL2BQ8TCT7 592 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 PMEPA1Q969W9 287 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 RNF157Q96PX1 679 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 PSKH2Q96QS6 385 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 RBBP8Q99708 897 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 CPNE1Q99829 537 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 PIH1D1Q9NWS0 290 aaKnown RBP13.59□□□□□ -0.23
PABPC1-208ENST00000519004 OSGIN1Q9UJX0 560 aa13.59□□□□□ -0.23
PABPC1-208ENST00000519004 TCRBV5S2A0A599 114 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 TRPC5OSA6NMA1 111 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 PDHXO00330 501 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 AP3D1O14617 1153 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 ARPC2O15144 300 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 MYCP01106 439 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 MPOP05164 745 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 C2P06681 752 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 PGAM1P18669 254 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 TBXAS1P24557 533 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 NPTX2P47972 431 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 LIMK2P53671 638 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms