RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 SEPT3Q9UH03 358 aa9.69□□□□□ -0.86
VCAN-210ENST00000513960 SLC45A1Q9Y2W3 748 aa9.69□□□□□ -0.86
VCAN-210ENST00000513960 KANSL1LA0AUZ9 987 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 TCAF2A6NFQ2 919 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 C9IYK1 514 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 GRID2O43424 1007 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 H2AFYO75367 372 aaKnown RBP9.68□□□□□ -0.86
VCAN-210ENST00000513960 BAIAP3O94812 1187 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 F2P00734 622 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 MYL3P08590 195 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 TKTP29401 623 aaKnown RBP9.68□□□□□ -0.86
VCAN-210ENST00000513960 NKX2-5P52952 324 aaPredicted RBP9.68□□□□□ -0.86
VCAN-210ENST00000513960 TUBA4AP68366 448 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 NIPAL4Q0D2K0 466 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 ZCCHC7Q8N3Z6 543 aaKnown RBP9.68□□□□□ -0.86
VCAN-210ENST00000513960 SLC7A14Q8TBB6 771 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 TBC1D15Q8TC07 691 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 TRPC4APQ8TEL6 797 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 BRI3BPQ8WY22 251 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 HTRA1Q92743 480 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 SDCCAG3Q96C92 435 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 RNF145Q96MT1 663 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 C1orf50Q9BV19 199 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 SLCO1B7G3V0H7 640 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 NRP2O60462 931 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 KCNE1P15382 129 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 STMN1P16949 149 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 ELK4P28324 431 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 TKTL1P51854 596 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 CDH13P55290 713 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 MPP1Q00013 466 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 VPS26BQ4G0F5 336 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 PIWIL3Q7Z3Z3 882 aaKnown RBP9.68□□□□□ -0.86
VCAN-210ENST00000513960 LZTR1Q8N653 840 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 TOP6BLQ8N6T0 577 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 NPLOC4Q8TAT6 608 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 WNT8BQ93098 351 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 SLC45A3Q96JT2 553 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 RANBP9Q96S59 729 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 TSPAN18Q96SJ8 248 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 C9orf16Q9BUW7 83 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 IPPQ9Y573 584 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 CORINQ9Y5Q5 1042 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 BMP10O95393 424 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 KRT75O95678 551 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 DLGAP3O95886 979 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 ATP6V1B2P21281 511 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 CES1P23141 567 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 SERPINB1P30740 379 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 MAP3K7CLP57077 242 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 SOX4Q06945 474 aaPredicted RBP9.68□□□□□ -0.86
VCAN-210ENST00000513960 BTG3Q14201 252 aaPredicted RBP9.68□□□□□ -0.86
VCAN-210ENST00000513960 WSCD1Q658N2 575 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 CYS1Q717R9 158 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 TLK2Q86UE8 772 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 STK32CQ86UX6 486 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 DENND6AQ8IWF6 608 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 ZNF567Q8N184 647 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 PNPLA1Q8N8W4 532 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 C17orf50Q8WW18 174 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 TMEM40Q8WWA1 233 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 NPLQ9BXD5 320 aaPredicted RBP9.68□□□□□ -0.86
VCAN-210ENST00000513960 CACNA2D2Q9NY47 1150 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 GJD2Q9UKL4 321 aa9.68□□□□□ -0.86
VCAN-210ENST00000513960 ACOT8O14734 319 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 TREHO43280 583 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 DLX3O60479 287 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 CABYRO75952 493 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 APOA4P06727 396 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 CHRM3P20309 590 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 RCVRNP35243 200 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 RPL34P49207 117 aaKnown RBP9.67□□□□□ -0.86
VCAN-210ENST00000513960 PSEN2P49810 448 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 NDUFV1P49821 464 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 PITX1P78337 314 aaPredicted RBP9.67□□□□□ -0.86
VCAN-210ENST00000513960 DGCR6Q14129 220 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 NIPAL1Q6NVV3 410 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 RWDD4Q6NW29 188 aaKnown RBP9.67□□□□□ -0.86
VCAN-210ENST00000513960 SLC2A7Q6PXP3 512 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 ZYG11AQ6WRX3 759 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 LYSMD3Q7Z3D4 306 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 OSTM1Q86WC4 334 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 CELF6Q96J87 481 aaKnown RBP9.67□□□□□ -0.86
VCAN-210ENST00000513960 MS4A4AQ96JQ5 239 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 SLC25A23Q9BV35 468 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 AP5M1Q9H0R1 490 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 EIF2B3Q9NR50 452 aaKnown RBP9.67□□□□□ -0.86
VCAN-210ENST00000513960 DDX28Q9NUL7 540 aaKnown RBP9.67□□□□□ -0.86
VCAN-210ENST00000513960 PCDHGA7Q9Y5G6 932 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 COMMD10Q9Y6G5 202 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 KRBA1A5PL33 1030 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 JCHAINP01591 159 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 WARSP23381 471 aaKnown RBP9.67□□□□□ -0.86
VCAN-210ENST00000513960 NMBRP28336 390 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 GLUD2P49448 558 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 TPI1P60174 286 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 FAM110CQ1W6H9 321 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 DACH2Q96NX9 599 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 EPS8L2Q9H6S3 715 aa9.67□□□□□ -0.86
VCAN-210ENST00000513960 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms