RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 SLC26A11Q86WA9 606 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 UBALD2Q8IYN6 164 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 FAM3CQ92520 227 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 RAB7BQ96AH8 199 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 KLHL32Q96NJ5 620 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 GABRG3Q99928 467 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 GPR63Q9BZJ6 419 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 TREX1Q9NSU2 369 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 MUTYHQ9UIF7 546 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 ZNF180Q9UJW8 692 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 SCML1Q9UN30 329 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 ZNF711Q9Y462 761 aa16.79■□□□□ 0.28
SCAMP1-203ENST00000510030 ZCWPW2A0A1B0GU75 182 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 FAM159BA6NKW6 160 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 UPK3BL1B0FP48 263 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 UPK3BL2E5RIL1 263 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 K7EQS6 105 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 STX7O15400 261 aaKnown RBP16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 LDB2O43679 373 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 SIN3BO75182 1162 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 MSLNQ13421 630 aaPredicted RBP16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 THOC5Q13769 683 aaKnown RBP16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 ARSIQ5FYB1 569 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 EOGTQ5NDL2 527 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 KIAA0408Q6ZU52 694 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 TPRG1Q6ZUI0 275 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 MARK2Q7KZI7 788 aaKnown RBP16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 KCNMB4Q86W47 210 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 CTAGE3PQ8IX95 158 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 CHST14Q8NCH0 376 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 NELL2Q99435 816 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 SH3GL2Q99962 352 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 CDH19Q9H159 772 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 ZFYVE1Q9HBF4 777 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 C20orf96Q9NUD7 363 aaPredicted RBP16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 NLE1Q9NVX2 485 aaPredicted RBP16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 SENP1Q9P0U3 644 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 WNT16Q9UBV4 365 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 PPM1HQ9ULR3 514 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 VPS9D1Q9Y2B5 631 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 HCN4Q9Y3Q4 1203 aa16.78■□□□□ 0.28
SCAMP1-203ENST00000510030 IQANK1A0A1B0GTG1 560 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 HMGB1P1B2RPK0 211 aaPredicted RBP16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 KPNA3O00505 521 aaPredicted RBP16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 RGS16O15492 202 aaPredicted RBP16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 RPP40O75818 363 aaKnown RBP16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 KRT37O76014 449 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 KRT38O76015 456 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 PSMA3P25788 255 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 ZBTB16Q05516 673 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 ARHGEF7Q14155 803 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 KBTBD12Q3ZCT8 623 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 AARS2Q5JTZ9 985 aaKnown RBP16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 FSTL4Q6MZW2 842 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 TXNDC11Q6PKC3 985 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 AFTPHQ6ULP2 937 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 RASSF3Q86WH2 238 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 STK40Q8N2I9 435 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 PIP4K2CQ8TBX8 421 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 MTBPQ96DY7 904 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 MFSD3Q96ES6 412 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 SGSM3Q96HU1 749 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 PAFAH2Q99487 392 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 CPNE1Q99829 537 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 PRSS16Q9NQE7 514 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 ARHGEF3Q9NR81 526 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 CACNA2D2Q9NY47 1150 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 LGALS13Q9UHV8 139 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 APPL1Q9UKG1 709 aa16.77■□□□□ 0.28
SCAMP1-203ENST00000510030 CKAP5Q14008 2032 aa16.77■□□□□ 0.27
SCAMP1-203ENST00000510030 C1orf232A0A0U1RR37 186 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 RGSL1A5PLK6 1076 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 C19orf67A6NJJ6 358 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 H0Y858 1186 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 H7C0S8 307 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 PSMD11O00231 422 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 IL1BP01584 269 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 SHBGP04278 402 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 HLA-EP13747 358 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 NMBRP28336 390 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 TIE1P35590 1138 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 PPARGP37231 505 aaPredicted RBP16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 NEK3P51956 506 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 ZNF140P52738 457 aaPredicted RBP16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 AGBL2Q5U5Z8 902 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 ZNF776Q68DI1 518 aaPredicted RBP16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 NAIF1Q69YI7 327 aaPredicted RBP16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 MRNIPQ6NTE8 343 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 FBXL19Q6PCT2 694 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 GALNT7Q86SF2 657 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 CNTN4Q8IWV2 1026 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 OR2T3Q8NH03 318 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 UHMK1Q8TAS1 419 aaKnown RBP16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 SLC44A1Q8WWI5 657 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 NSMCE3Q96MG7 304 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 TTC1Q99614 292 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 HDAC8Q9BY41 377 aa16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 RSPH9Q9H1X1 276 aaPredicted RBP16.76■□□□□ 0.27
SCAMP1-203ENST00000510030 MFSD1Q9H3U5 465 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms