RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 DCLK3Q9C098 648 aa5.98□□□□□ -1.45
SMG7-208ENST00000493609 HIF1ANQ9NWT6 349 aa5.98□□□□□ -1.45
SMG7-208ENST00000493609 ABI3Q9P2A4 366 aa5.98□□□□□ -1.45
SMG7-208ENST00000493609 CNOT8Q9UFF9 292 aaKnown RBP5.98□□□□□ -1.45
SMG7-208ENST00000493609 SLCO3A1Q9UIG8 710 aa5.98□□□□□ -1.45
SMG7-208ENST00000493609 CEPT1Q9Y6K0 416 aa5.98□□□□□ -1.45
SMG7-208ENST00000493609 NESP48681 1621 aa5.98□□□□□ -1.45
SMG7-208ENST00000493609 ABCA5Q8WWZ7 1642 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 FAM237AA0A1B0GTK4 181 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 DOK2O60496 412 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 ZBED4O75132 1171 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 NDUFB4O95168 129 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 VNN2O95498 520 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 MLYCDO95822 493 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 SCGB1D1O95968 90 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 EIF2S1P05198 315 aaKnown RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 HOXB5P09067 269 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 ACADMP11310 421 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 RARGP13631 454 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 CHATP28329 748 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 CDC25AP30304 524 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 HOXD3P31249 432 aaPredicted RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 PGGT1BP53609 377 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 F2RL1P55085 397 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 Q0VFX4 171 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 MAMLD1Q13495 774 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 OLIG2Q13516 323 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 CXorf66Q5JRM2 361 aaPredicted RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 KLHL24Q6TFL4 600 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 LINGO2Q7L985 606 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 CCDC13Q8IYE1 715 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 AADATQ8N5Z0 425 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 NSMCE1Q8WV22 266 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 ZBTB9Q96C00 473 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 SF3B5Q9BWJ5 86 aaKnown RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 C1QTNF5Q9BXJ0 243 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 MUC13Q9H3R2 512 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 MRPL44Q9H9J2 332 aaKnown RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 MKKSQ9NPJ1 570 aaPredicted RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 TBC1D22BQ9NU19 505 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 SEPT11Q9NVA2 429 aaKnown RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 MAP3K20Q9NYL2 800 aaKnown RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 EHD2Q9NZN4 543 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 FBXO9Q9UK97 447 aaPredicted RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 URB2Q14146 1524 aaKnown RBP5.97□□□□□ -1.45
SMG7-208ENST00000493609 ABCA10Q8WWZ4 1543 aa5.97□□□□□ -1.45
SMG7-208ENST00000493609 KIF21BO75037 1637 aa5.96□□□□□ -1.45
SMG7-208ENST00000493609 IGHV4-28A0A0C4DH34 117 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 FAM90A10PA6NDY2 464 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 TMEM202A6NGA9 273 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 LIPT2A6NK58 231 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 HNRNPCL1O60812 293 aaKnown RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 PTP4A3O75365 173 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 TIPRLO75663 272 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 NKX2-2O95096 273 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 CYC1P08574 325 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 RPL3P39023 403 aaKnown RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 MLH1P40692 756 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 MXI1P50539 228 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 ARF3P61204 181 aaPredicted RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 ARF1P84077 181 aaKnown RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 GOLGA8DPQ0D2H9 430 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 CSTF3Q12996 717 aaKnown RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 NAE1Q13564 534 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 SHBQ15464 509 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 TYW3Q6IPR3 259 aaKnown RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 NCEH1Q6PIU2 408 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 CCDC129Q6ZRS4 1044 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 MTSS1LQ765P7 747 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 SCCPDHQ8NBX0 429 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 AGBL3Q8NEM8 1001 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 NEK9Q8TD19 979 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 CREB3L4Q8TEY5 395 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 ARHGEF2Q92974 986 aaKnown RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 TXNDC15Q96J42 360 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 SLITRK1Q96PX8 696 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 ESRP2Q9H6T0 727 aaKnown RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 GPR108Q9NPR9 543 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 EIF2B3Q9NR50 452 aaKnown RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 DLGAP2Q9P1A6 1054 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 MYO6Q9UM54 1294 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 STON1Q9Y6Q2 735 aa5.96□□□□□ -1.46
SMG7-208ENST00000493609 POLA1P09884 1462 aaPredicted RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 TARBP1Q13395 1621 aaKnown RBP5.96□□□□□ -1.46
SMG7-208ENST00000493609 ERICH3Q5RHP9 1530 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 FSD2A1L4K1 749 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 DYTNA2CJ06 578 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 G6PDP11413 515 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 EIF2S3P41091 472 aaKnown RBP5.95□□□□□ -1.46
SMG7-208ENST00000493609 PCYT1AP49585 367 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 CKAP5Q14008 2032 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 NEDD9Q14511 834 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 WDR78Q5VTH9 848 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 TMED8Q6PL24 325 aaPredicted RBP5.95□□□□□ -1.46
SMG7-208ENST00000493609 B3GNT6Q6ZMB0 384 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 SLC41A2Q96JW4 573 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 FAM110AQ9BQ89 295 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 FTOQ9C0B1 505 aaKnown RBP eCLIP5.95□□□□□ -1.46
SMG7-208ENST00000493609 HCFC1R1Q9NWW0 138 aa5.95□□□□□ -1.46
SMG7-208ENST00000493609 RCOR1Q9UKL0 485 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms