RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 SEMA4BQ9NPR2 832 aaPredicted RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 SCN10AQ9Y5Y9 1956 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 PRORSD1PA6NEY8 169 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 MANSC4A6NHS7 340 aaPredicted RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 H3BMM5 538 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 LDB2O43679 373 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 COL6A2P12110 1019 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 GFAPP14136 432 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 SH3BP2P78314 561 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 CDKL1Q00532 357 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 CAPRIN1Q14444 709 aaKnown RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 TMEM173Q86WV6 379 aaPredicted RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 LGI2Q8N0V4 545 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 ARRDC2Q8TBH0 407 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 DIS3LQ8TF46 1054 aaKnown RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 NMD3Q96D46 503 aaKnown RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 CNDP1Q96KN2 507 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 MID1IP1Q9NPA3 183 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 EGFL7Q9UHF1 273 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 LINC00032P0C843 101 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 BMP1P13497 986 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 CASP2P42575 452 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 RGRP47804 291 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 PRKAA2P54646 552 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 FRG1Q14331 258 aaKnown RBP15.74■□□□□ 0.11
BRD9-208ENST00000489816 LINC01599Q8WXQ3 324 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 PPWD1Q96BP3 646 aaKnown RBP15.74■□□□□ 0.11
BRD9-208ENST00000489816 NR1H4Q96RI1 486 aaPredicted RBP15.74■□□□□ 0.11
BRD9-208ENST00000489816 SNX13Q9Y5W8 968 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 A0A087X1B8 175 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 C15orf38-AP3S2A0A0A6YYH1 394 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 IRF1P10914 325 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 HOXC13P31276 330 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 RAB27AP51159 221 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 ZNF135P52742 658 aaPredicted RBP15.74■□□□□ 0.11
BRD9-208ENST00000489816 OR4D1Q15615 310 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 PLA2G4EQ3MJ16 856 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 PRSS55Q6UWB4 352 aaPredicted RBP15.74■□□□□ 0.11
BRD9-208ENST00000489816 CYHR1Q6ZMK1 362 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 ARPINQ7Z6K5 226 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 SAPCD2Q86UD0 394 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 EFHBQ8N7U6 833 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 LRTOMTQ8WZ04 291 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 SLC39A13Q96H72 371 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 NSMCE3Q96MG7 304 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 GALPQ9UBC7 116 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 PCDHGC4Q9Y5F7 938 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 PCDHGA7Q9Y5G6 932 aa15.74■□□□□ 0.11
BRD9-208ENST00000489816 TRPC5OSA6NMA1 111 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 NR5A2O00482 541 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 SLC2A3P11169 496 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 RHOQP17081 205 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 PRDX6P30041 224 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 LEPRP48357 1165 aaKnown RBP15.73■□□□□ 0.11
BRD9-208ENST00000489816 PLIN5Q00G26 463 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 CYTH1Q15438 398 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 VPS26BQ4G0F5 336 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 RGMBQ6NW40 437 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 LINGO4Q6UY18 593 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 RNF19BQ6ZMZ0 732 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 ZNF598Q86UK7 904 aaKnown RBP15.73■□□□□ 0.11
BRD9-208ENST00000489816 LPGAT1Q92604 370 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 GSTO2Q9H4Y5 243 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 ZNF385DQ9H6B1 395 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 GKN1Q9NS71 199 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 SPATS2LQ9NUQ6 558 aaKnown RBP15.73■□□□□ 0.11
BRD9-208ENST00000489816 AP4B1Q9Y6B7 739 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 MIA3Q5JRA6 1907 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 TRPM7Q96QT4 1865 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 CD3EAPO15446 510 aaKnown RBP15.73■□□□□ 0.11
BRD9-208ENST00000489816 GLP2RO95838 553 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 ATXN1LP0C7T5 689 aaKnown RBP15.73■□□□□ 0.11
BRD9-208ENST00000489816 CKBP12277 381 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 UGT1A6P19224 532 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 RPL10P27635 214 aaKnown RBP15.73■□□□□ 0.11
BRD9-208ENST00000489816 GSTT1P30711 240 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 PFKPQ01813 784 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 GRB7Q14451 532 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 GSTA3Q16772 222 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 C16orf59Q7L2K0 433 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 TAS1R1Q7RTX1 841 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 UMODL1-AS1Q8N2C9 162 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 NUDT8Q8WV74 236 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 EME1Q96AY2 570 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 PRKD2Q9BZL6 878 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 PCDHB8Q9UN66 801 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 PCDHB5Q9Y5E4 795 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 V9GYQ6 96 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 TET1Q8NFU7 2136 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 ENPP3O14638 875 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 TLR5O60602 858 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 CRTAMO95727 393 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 SLC7A2P52569 658 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 REP15Q6BDI9 236 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 NADSYN1Q6IA69 706 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 ABI1Q8IZP0 508 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 ST13P4Q8IZP2 240 aaPredicted RBP15.73■□□□□ 0.11
BRD9-208ENST00000489816 PRPF18Q99633 342 aaKnown RBP15.73■□□□□ 0.11
BRD9-208ENST00000489816 ZBED2Q9BTP6 218 aa15.73■□□□□ 0.11
BRD9-208ENST00000489816 CACNA2D2Q9NY47 1150 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms