RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 DNAJB1P25685 340 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 CLCN5P51795 746 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 NSUN2Q08J23 767 aaKnown RBP eCLIP16.69■□□□□ 0.26
TVP23B-202ENST00000476139 PTPRRQ15256 657 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 THEMIS2Q5TEJ8 643 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 SLC8B1Q6J4K2 584 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 EP400NLQ6ZTU2 488 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 TTLL2Q9BWV7 592 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 UNC93B1Q9H1C4 597 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 GTSE1Q9NYZ3 720 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 A0A0U1RQS6 177 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 SERPINF2P08697 491 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 IRF1P10914 325 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 PIK3R1P27986 724 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 PRKAA2P54646 552 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 DSG1Q02413 1049 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 SMARCB1Q12824 385 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 CMPK2Q5EBM0 449 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 C16orf59Q7L2K0 433 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 SNX32Q86XE0 403 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 ACTRT2Q8TDY3 377 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 ZNF296Q8WUU4 475 aaPredicted RBP16.68■□□□□ 0.26
TVP23B-202ENST00000476139 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.68■□□□□ 0.26
TVP23B-202ENST00000476139 C2orf78A6NCI8 922 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 CD3EAPO15446 510 aaKnown RBP16.68■□□□□ 0.26
TVP23B-202ENST00000476139 IPO13O94829 963 aaKnown RBP16.68■□□□□ 0.26
TVP23B-202ENST00000476139 HMGA1P17096 107 aaKnown RBP16.68■□□□□ 0.26
TVP23B-202ENST00000476139 NUDT2P50583 147 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 TIAL1Q01085 375 aaKnown RBP eCLIP16.68■□□□□ 0.26
TVP23B-202ENST00000476139 PGM2L1Q6PCE3 622 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 ISCA2Q86U28 154 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 SLAIN1Q8ND83 568 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 ARHGAP26Q9UNA1 814 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 CDYLQ9Y232 598 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 SCN5AQ14524 2016 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 GLP2RO95838 553 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 PEX2P28328 305 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 KPNA1P52294 538 aaPredicted RBP16.68■□□□□ 0.26
TVP23B-202ENST00000476139 SFT2D3Q587I9 215 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 OR52E8Q6IFG1 317 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 KIAA1841Q6NSI8 718 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 ACAD11Q709F0 780 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 RYBPQ8N488 228 aaPredicted RBP16.68■□□□□ 0.26
TVP23B-202ENST00000476139 BRSK1Q8TDC3 778 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 VCXQ9H320 206 aa16.68■□□□□ 0.26
TVP23B-202ENST00000476139 CBX4O00257 560 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 PITPNM1O00562 1244 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 CORO1AP31146 461 aaKnown RBP16.67■□□□□ 0.26
TVP23B-202ENST00000476139 SLC11A2P49281 568 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 PFKPQ01813 784 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 SLC14A2Q15849 920 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 HECTD3Q5T447 861 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 PIWIL4Q7Z3Z4 852 aaKnown RBP16.67■□□□□ 0.26
TVP23B-202ENST00000476139 PDCD6IPQ8WUM4 868 aaKnown RBP16.67■□□□□ 0.26
TVP23B-202ENST00000476139 GATA6Q92908 595 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 FEM1CQ96JP0 617 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 TUBGCP5Q96RT8 1024 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 TMEM175Q9BSA9 504 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 MRPL9Q9BYD2 267 aaKnown RBP16.67■□□□□ 0.26
TVP23B-202ENST00000476139 MTRRQ9UBK8 725 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 SPO11Q9Y5K1 396 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 STC2O76061 302 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 SULT2A1Q06520 285 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 ACAP2Q15057 778 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 USP41Q3LFD5 358 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 TTC16Q8NEE8 873 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 C2orf15Q8WU43 125 aaKnown RBP16.67■□□□□ 0.26
TVP23B-202ENST00000476139 USP13Q92995 863 aaPredicted RBP16.67■□□□□ 0.26
TVP23B-202ENST00000476139 PTERQ96BW5 349 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 DEFB118Q96PH6 123 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 TRIB3Q96RU7 358 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 ZBED2Q9BTP6 218 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 SMPD4Q9NXE4 827 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 VTI1BQ9UEU0 232 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 PCDHGC4Q9Y5F7 938 aa16.67■□□□□ 0.26
TVP23B-202ENST00000476139 RGSL1A5PLK6 1076 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 UBFD1O14562 309 aaKnown RBP16.66■□□□□ 0.26
TVP23B-202ENST00000476139 NPHS1O60500 1241 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 CCNT2O60583 730 aaKnown RBP16.66■□□□□ 0.26
TVP23B-202ENST00000476139 RAG1P15918 1043 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 HLA-DPA1P20036 260 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 PKNOX1P55347 436 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 DNAJB13P59910 316 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 C1QTNF8P60827 252 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 C5orf22Q49AR2 442 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 FOXB2Q5VYV0 432 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 KLC3Q6P597 504 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 LINGO4Q6UY18 593 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 DHDDSQ86SQ9 333 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 LRRC43Q8N309 656 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 EXT2Q93063 718 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 RMDN1Q96DB5 314 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 CNDP1Q96KN2 507 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 MGME1Q9BQP7 344 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 RTKNQ9BST9 563 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 MAGEH1Q9H213 219 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 HIPK3Q9H422 1215 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 COMMD8Q9NX08 183 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 STX16-NPEPL1H3BU86 382 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms