RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 S100ZQ8WXG8 99 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 VPS33AQ96AX1 596 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 ADI1Q9BV57 179 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 RUBCNLQ9H714 662 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 COG4Q9H9E3 785 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 AKIP1Q9NQ31 210 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 ZMAT5Q9UDW3 170 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 TRIP12Q14669 1992 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 CELF2O95319 508 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 HOXC8P31273 242 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 LEPRP48357 1165 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLC10A2Q12908 348 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 PRR23CQ6ZRP0 262 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 RMDN1Q96DB5 314 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 CSF3RQ99062 836 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 CLPBQ9H078 707 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 TCF7L2Q9NQB0 619 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 SETD4Q9NVD3 440 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 STMN3Q9NZ72 180 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 RCOR3Q9P2K3 495 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 KCNN3Q9UGI6 736 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 ANKRD6Q9Y2G4 727 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 TESMINQ9Y4I5 508 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 NME7Q9Y5B8 376 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 TOR1BO14657 336 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 PSMD3O43242 534 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 MFN2O95140 757 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 M6PRP20645 277 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 S100A5P33763 92 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 SEMA5AQ13591 1074 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 HERC3Q15034 1050 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 C2orf69Q8N8R5 385 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 CYGBQ8WWM9 190 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 CPXM1Q96SM3 734 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 SORT1Q99523 831 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 LRRC40Q9H9A6 602 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 XPNPEP3Q9NQH7 507 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 ADA2Q9NZK5 511 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 PCDHB12Q9Y5F1 795 aa13.51□□□□□ -0.25
SYNGAP1-204ENST00000449372 A0A0A0MRY4 1105 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 MAGEB16A2A368 324 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 ACOX3O15254 700 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 PHGDHO43175 533 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 TRIM13O60858 407 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 RFPL2O75678 378 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 EEF1B2P24534 225 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 GPD2P43304 727 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 PTPN9P43378 593 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 YAP1P46937 504 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 MERTKQ12866 999 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 ATG14Q6ZNE5 492 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 SNX31Q8N9S9 440 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 ZFP90Q8TF47 636 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 SPATA13Q96N96 652 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 CPNE5Q9HCH3 593 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 C2CD4BA6NLJ0 364 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 NADKO95544 446 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 CYP2F1P24903 491 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 RACK1P63244 317 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 TMEM132DQ14C87 1099 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLC9B1Q4ZJI4 515 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 FAXCQ5TGI0 409 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 ZCCHC8Q6NZY4 707 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 ABRAXAS1Q6UWZ7 409 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 COLGALT2Q8IYK4 626 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 RASSF5Q8WWW0 418 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 STON2Q8WXE9 905 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 NRBF2Q96F24 287 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 DHX35Q9H5Z1 703 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 C12orf10Q9HB07 376 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 MTRRQ9UBK8 725 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 UGT2A1Q9Y4X1 527 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 RRN3P2A6NIE6 340 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 SAC3D1A6NKF1 404 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 AREL1O15033 823 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 PFKMP08237 780 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 GLULP15104 373 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 MRPS15P82914 257 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 RHDQ02161 417 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 PRKAA1Q13131 559 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 NPTX1Q15818 432 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 UGP2Q16851 508 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 PRAMEF19Q5SWL8 479 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 TUBA3EQ6PEY2 450 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 PRR23BQ6ZRT6 265 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 CCDC28AQ8IWP9 274 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 BRSK1Q8TDC3 778 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 SNX19Q92543 992 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 TRIM15Q9C019 465 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 PCDHAC1Q9H158 963 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 COPG2Q9UBF2 871 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 DSEQ9UL01 958 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 DERAQ9Y315 318 aa13.5□□□□□ -0.25
SYNGAP1-204ENST00000449372 NRCAMQ92823 1304 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 TRPC5OSA6NMA1 111 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 HAT1O14929 419 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 GSRP00390 522 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 SMIM10L2AP0DMW4 78 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms