RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 CLASP2O75122 1294 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 SNNO75324 88 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 HAUS5O94927 633 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 FSBPO95073 299 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 IGSF6O95976 241 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 RALBP11234 206 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 GJA1P17302 382 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 SYN1P17600 705 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 LPOP22079 712 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 PSMA3P25788 255 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC26A3P40879 764 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 GRIA4P48058 902 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 ARFIP2P53365 341 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 EPHB1P54762 984 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 IRX4P78413 519 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 OCRLQ01968 901 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 ACTN3Q08043 901 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 SF3A3Q12874 501 aaKnown RBP eCLIP10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 PCLAFQ15004 111 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 TEAD2Q15562 447 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 FAM45BPQ6NSW5 357 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 AFTPHQ6ULP2 937 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 LINGO4Q6UY18 593 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 TPGS1Q6ZTW0 290 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 PTAR1Q7Z6K3 402 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 TBC1D1Q86TI0 1168 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC41A1Q8IVJ1 513 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 WDR75Q8IWA0 830 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 SIX5Q8N196 739 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 KIAA1958Q8N8K9 716 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 GPATCH11Q8N954 259 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 LPCAT1Q8NF37 534 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 OR4L1Q8NH43 312 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 FAM45AQ8TCE6 357 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 PPM1EQ8WY54 764 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 TCF12Q99081 682 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 C19orf43Q9BQ61 176 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 CAB39LQ9H9S4 337 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 CATSPERZQ9NTU4 200 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 ABCF3Q9NUQ8 709 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 ABCB8Q9NUT2 735 aa10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 INTS10Q9NVR2 710 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-203ENST00000448935 TMEM114B3SHH9 223 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC9A3R1O14745 358 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 SCAMP3O14828 347 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 GRM6O15303 877 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 CD3EAPO15446 510 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 PRMT3O60678 531 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 GJB3O75712 270 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 KLHL2O95198 593 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 GOT2P00505 430 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 PRLP01236 227 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC35E2BP0CK96 405 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 MYL2P10916 166 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 FGF3P11487 239 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 SAT1P21673 171 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 SKIV2L2P42285 1042 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 MAGEA9P43362 315 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 ABCG1P45844 678 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 ZNF140P52738 457 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 SULT2A1Q06520 285 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 OVGP1Q12889 678 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 LMAN2Q12907 356 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 DMC1Q14565 340 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 FAM83EQ2M2I3 478 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 PLEKHG6Q3KR16 790 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 ARMC12Q5T9G4 340 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 MBLAC2Q68D91 279 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 KLC3Q6P597 504 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 ZNF687Q8N1G0 1237 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 CDKN2AIPNLQ96HQ2 116 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 DNAJC1Q96KC8 554 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 SCYL1Q96KG9 808 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 TBATAQ96M53 351 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 TUBB6Q9BUF5 446 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 STN1Q9H668 368 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 POPDC3Q9HBV1 291 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 FBXO6Q9NRD1 293 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 HCFC1R1Q9NWW0 138 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 KCNK4Q9NYG8 393 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 RUVBL2Q9Y230 463 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 PCDHGC4Q9Y5F7 938 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 ARL5AQ9Y689 179 aa10.59□□□□□ -0.71
VIPAS39-203ENST00000448935 A0A0G2JND7 137 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 CCDC195A0A1B0GUA6 201 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 ANKRD33BA6NCL7 494 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 H0YHG0 523 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 TRIM13O60858 407 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 SOCS5O75159 536 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 RFPL2O75678 378 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 SNUPNO95149 360 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 S1PR4O95977 384 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 TOP3BO95985 862 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 GSRP00390 522 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 EPCAMP16422 314 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 PMLP29590 882 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 CCR2P41597 374 aa10.58□□□□□ -0.72
VIPAS39-203ENST00000448935 SCTRP47872 440 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms