RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 GPR75-ASB3A0A0A6YYF3 556 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 TBC1D3FA6NER0 549 aaPredicted RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 RIIAD1A6NNX1 92 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 TBC1D3LB9A6J9 549 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 DCXO43602 365 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 TBC1D3HP0C7X1 549 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 NR4A1P22736 598 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 SREBF1P36956 1147 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 GNALP38405 381 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 PSME3P61289 254 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ZNF155Q12901 538 aaPredicted RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 RRP1BQ14684 758 aaKnown RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 COLEC12Q5KU26 742 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 GPR158Q5T848 1215 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 TBC1D3GQ6DHY5 549 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 TBC1D3CQ6IPX1 549 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ZNF720Q7Z2F6 126 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 MCOLN2Q8IZK6 566 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 TBC1D3Q8IZP1 549 aaPredicted RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 SLC2A14Q8TDB8 520 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 CEP41Q9BYV8 373 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 COMMD4Q9H0A8 199 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ATPIF1Q9UII2 106 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 FBXO9Q9UK97 447 aaPredicted RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 CNTNAP5Q8WYK1 1306 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 OR1I1O60431 355 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 CST1P01037 141 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 HGFP14210 728 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 CDH8P55286 799 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 RPL38P63173 70 aaKnown RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 RAP1GAP2Q684P5 730 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 CAPN13Q6MZZ7 669 aaPredicted RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 FAM131AQ6UXB0 335 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ADGRG6Q86SQ4 1221 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ZNF227Q86WZ6 799 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 REPS2Q8NFH8 660 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 CLP1Q92989 425 aaKnown RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 NSMCE3Q96MG7 304 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 AGO4Q9HCK5 861 aaKnown RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 C12orf4Q9NQ89 552 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 NKIRAS2Q9NYR9 191 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 WASF3Q9UPY6 502 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 GRIN2DO15399 1336 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 FAM205CA6NFA0 338 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ARL5CA6NH57 179 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 RFXANKO14593 260 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 UBXN7O94888 489 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 HMGCRP04035 888 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 LAMP2P13473 410 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 BDNFP23560 247 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 CDC25CP30307 473 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 PLK1P53350 603 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 FOXO4P98177 505 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 NUP54Q7Z3B4 507 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 FBXW8Q8N3Y1 598 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ZSCAN4Q8NAM6 433 aaPredicted RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 FAM13CQ8NE31 585 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 TAS1R2Q8TE23 839 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 WNT8BQ93098 351 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 C12orf66Q96MD2 445 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ZYG11BQ9C0D3 744 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.31□□□□□ -1.084e-7■■□□□ 11.9
LPP-208ENST00000448637 RDH8Q9NYR8 311 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ATXN10Q9UBB4 475 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 TMA7Q9Y2S6 64 aaKnown RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 L7N2F9 121 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 KERAO60938 352 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 NOS1APO75052 506 aaPredicted RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 IDSP22304 550 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 CAV3P56539 151 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 VAMP2P63027 116 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 MRPS22P82650 360 aaKnown RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 FSCN1Q16658 493 aaKnown RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 SLC9B1Q4ZJI4 515 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 SPDYCQ5MJ68 293 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ZNF697Q5TEC3 545 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ANO7Q6IWH7 933 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 FIP1L1Q6UN15 594 aaKnown RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 ZPBP2Q6X784 338 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ZNF730Q6ZMV8 503 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 LRRC70Q7Z2Q7 622 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 EIF1ADQ8N9N8 165 aaKnown RBP8.31□□□□□ -1.08
LPP-208ENST00000448637 C1orf216Q8TAB5 229 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ETNPPLQ8TBG4 499 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 SNX33Q8WV41 574 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 LRRC46Q96FV0 321 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 AP1S3Q96PC3 154 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 FCRL4Q96PJ5 515 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 MTMR9Q96QG7 549 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 SPATC1LQ9H0A9 340 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 SPAG4Q9NPE6 437 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 ZNF446Q9NWS9 450 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 COPS7AQ9UBW8 275 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 SNX7Q9UNH6 387 aa8.31□□□□□ -1.08
LPP-208ENST00000448637 UGGT1Q9NYU2 1555 aa8.3□□□□□ -1.08
LPP-208ENST00000448637 PLK4O00444 970 aa8.3□□□□□ -1.08
LPP-208ENST00000448637 USP17L7P0C7H9 530 aa8.3□□□□□ -1.08
LPP-208ENST00000448637 ELFN1P0C7U0 828 aa8.3□□□□□ -1.08
LPP-208ENST00000448637 SAGP10523 405 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms