RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 IFI35P80217 286 aaPredicted RBP14.85□□□□□ -0.03
LIMS4-201ENST00000413601 ADCY2Q08462 1091 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 MTM1Q13496 603 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 TFDP2Q14188 446 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 PROX2Q3B8N5 592 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 TFDP3Q5H9I0 405 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 FAXCQ5TGI0 409 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 DHRS13Q6UX07 377 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 MACC1Q6ZN28 852 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 NYAP1Q6ZVC0 841 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 KIAA1328Q86T90 577 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 TSPAN33Q86UF1 283 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 CCDC50Q8IVM0 306 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 RCOR2Q8IZ40 523 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 RBFAQ8N0V3 343 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 CNTD1Q8N815 330 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 ZNF548Q8NEK5 533 aaPredicted RBP14.85□□□□□ -0.03
LIMS4-201ENST00000413601 COQ10AQ96MF6 247 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 MCCC1Q96RQ3 725 aaPredicted RBP14.85□□□□□ -0.03
LIMS4-201ENST00000413601 SEPT10Q9P0V9 454 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 CHKBQ9Y259 395 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.85□□□□□ -0.03
LIMS4-201ENST00000413601 PPIL1Q9Y3C6 166 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 MSRB2Q9Y3D2 182 aa14.85□□□□□ -0.03
LIMS4-201ENST00000413601 hCG_1818297A0A087WSY0 165 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 FAM221BA6H8Z2 402 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 NEMP2A6NFY4 417 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 BTNL10A8MVZ5 291 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 C1QTNF9BB2RNN3 333 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 PPP1R12AO14974 1030 aaPredicted RBP14.84□□□□□ -0.03
LIMS4-201ENST00000413601 SCAMP1O15126 338 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 PJA2O43164 708 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 AQP9O43315 295 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 PRLP01236 227 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 MMP2P08253 660 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 C1QTNF9P0C862 333 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 PECAM1P16284 738 aaPredicted RBP14.84□□□□□ -0.03
LIMS4-201ENST00000413601 CKMT2P17540 419 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 HNF1BP35680 557 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 CD86P42081 329 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 ACADVLP49748 655 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 PEX5P50542 639 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 EPHB1P54762 984 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 NFATC4Q14934 902 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 HS1BP3Q53T59 392 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 ENPP7Q6UWV6 458 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 USP45Q70EL2 814 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 HSD11B1LQ7Z5J1 315 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 MARCH9Q86YJ5 346 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 PHACTR4Q8IZ21 702 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 PELI3Q8N2H9 469 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 EXD1Q8NHP7 514 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 LMX1AQ8TE12 382 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 BTN2A2Q8WVV5 523 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 TSACCQ96A04 125 aaPredicted RBP14.84□□□□□ -0.03
LIMS4-201ENST00000413601 NUS1Q96E22 293 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 CALR3Q96L12 384 aaKnown RBP14.84□□□□□ -0.03
LIMS4-201ENST00000413601 AGAP3Q96P47 875 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 DESI2Q9BSY9 194 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 TDRD1Q9BXT4 1180 aaKnown RBP14.84□□□□□ -0.03
LIMS4-201ENST00000413601 SLC13A1Q9BZW2 595 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 NLGN3Q9NZ94 848 aa14.84□□□□□ -0.03
LIMS4-201ENST00000413601 APOBEC3BQ9UH17 382 aaKnown RBP14.84□□□□□ -0.03
LIMS4-201ENST00000413601 GOLGA4Q13439 2230 aaKnown RBP14.84□□□□□ -0.03
LIMS4-201ENST00000413601 A0A0J9YYE9 177 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 A0A0U1RQJ8 604 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 K7ESM1 405 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 GCATO75600 419 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 RFPL3O75679 317 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 TRBC1P01850 177 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 ALPPL2P10696 532 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 MYF5P13349 255 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 TGM2P21980 687 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 CA4P22748 312 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 HTR1BP28222 390 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 ETV3P41162 512 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 NR2C2P49116 596 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 SKOR1P84550 965 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 PPARDQ03181 441 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 C1orf61Q13536 156 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 ARHGEF7Q14155 803 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 DEFB133Q30KQ1 61 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 PRRT3Q5FWE3 981 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 PNCKQ6P2M8 343 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 UNQ6494/PRO21346Q6UXR6 183 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 TMPRSS7Q7RTY8 843 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 RD3Q7Z3Z2 195 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 HID1Q8IV36 788 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 NDUFAF2Q8N183 169 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 CBARPQ8N350 705 aaPredicted RBP14.83□□□□□ -0.04
LIMS4-201ENST00000413601 LPCAT1Q8NF37 534 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 KIAA1524Q8TCG1 905 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 GATA6Q92908 595 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 FUBP1Q96AE4 644 aaKnown RBP14.83□□□□□ -0.04
LIMS4-201ENST00000413601 RBM41Q96IZ5 413 aaKnown RBP14.83□□□□□ -0.04
LIMS4-201ENST00000413601 APOLD1Q96LR9 279 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 WDR92Q96MX6 357 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 LRRC61Q9BV99 259 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 HEMGNQ9BXL5 484 aa14.83□□□□□ -0.04
LIMS4-201ENST00000413601 TMEM121BQ9BXQ6 578 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms