RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 TRIM13O60858 407 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 MMP20O60882 483 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 GJB5O95377 273 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PRKCGP05129 697 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 RHOCP08134 193 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ATXN1LP0C7T5 689 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ALOX15P16050 662 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PFKLP17858 780 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 HOXD9P28356 352 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ACVRL1P37023 503 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 GJA8P48165 433 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 LEPRP48357 1165 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SLC12A2P55011 1212 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 OXCT1P55809 520 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ABCE1P61221 599 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 WDR5P61964 334 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ELF3P78545 371 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SEPT6Q14141 434 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PPM1JQ5JR12 505 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SIRPB2Q5JXA9 342 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 FBXW10Q5XX13 1052 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 IL31Q6EBC2 164 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF470Q6ECI4 717 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 DNAJB7Q7Z6W7 309 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 TBC1D1Q86TI0 1168 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 DENND1CQ8IV53 801 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PGBD5Q8N414 524 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 MAGEC3Q8TD91 643 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 BRSK1Q8TDC3 778 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ARMC5Q96C12 935 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 VWCEQ96DN2 955 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 THOC1Q96FV9 657 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SEMA3CQ99985 751 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 CINPQ9BW66 212 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ACE2Q9BYF1 805 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 C11orf49Q9H6J7 331 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 TRPC7Q9HCX4 862 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF510Q9Y2H8 683 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PCDHB12Q9Y5F1 795 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PCDHGB7Q9Y5F8 929 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 INSL5Q9Y5Q6 135 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 CXorf51AA0A1B0GTR3 108 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 NRG2O14511 850 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 GFRA3O60609 400 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 KLHL2O95198 593 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 NDST3O95803 873 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 OLFM2O95897 454 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SERPINA6P08185 405 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SLC35E2BP0CK96 405 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 CALB2P22676 271 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 GABRB3P28472 473 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PTPN4P29074 926 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SERPINB3P29508 390 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 HNRNPH1P31943 449 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SERPINB5P36952 375 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SLC1A2P43004 574 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 CHRNA4P43681 627 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 MAXP61244 160 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PRAMEP78395 509 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 TWF1Q12792 350 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SNCBQ16143 134 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 INO80DQ53TQ3 878 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 RFWD3Q6PCD5 774 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 FBXO46Q6PJ61 603 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ZYG11AQ6WRX3 759 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 CIR1Q86X95 450 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 C10orf107Q8IVU9 208 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 KIRREL3Q8IZU9 778 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SLC25A41Q8N5S1 370 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 HJURPQ8NCD3 748 aaPredicted RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 OR13H1Q8NG92 308 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 GPR150Q8NGU9 434 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 STYXQ8WUJ0 223 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 CCDC126Q96EE4 140 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 ATXN7L3BQ96GX2 97 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 C1QTNF1Q9BXJ1 281 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SUV39H2Q9H5I1 410 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 SRA1Q9HD15 236 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 OXSMQ9NWU1 459 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 DNAJC28Q9NX36 388 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 AGO1Q9UL18 857 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 APOBEC2Q9Y235 224 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PCDHGC4Q9Y5F7 938 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 MRPL42Q9Y6G3 142 aaKnown RBP7.53□□□□□ -1.2
CXCR4-202ENST00000409817 PCNTO95613 3336 aa7.53□□□□□ -1.2
CXCR4-202ENST00000409817 CCDC195A0A1B0GUA6 201 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 SLCO1B7G3V0H7 640 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 G3V2L1 256 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 LDB2O43679 373 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 BNIP3LO60238 219 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 CRTAMO95727 393 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 TOP3BO95985 862 aaKnown RBP7.52□□□□□ -1.21
CXCR4-202ENST00000409817 KLKB1P03952 638 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 T-ENOLP0DO92 83 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 MBL2P11226 248 aaPredicted RBP7.52□□□□□ -1.21
CXCR4-202ENST00000409817 CR2P20023 1033 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 OGNP20774 298 aaKnown RBP7.52□□□□□ -1.21
CXCR4-202ENST00000409817 PSMA3P25788 255 aa7.52□□□□□ -1.21
CXCR4-202ENST00000409817 AQP5P55064 265 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms