RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 OXSMQ9NWU1 459 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 NUDT5Q9UKK9 219 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 SMIM28A0A1B0GU29 152 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 FAM20BO75063 409 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 FGF19O95750 216 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 ATP5C1P36542 298 aaKnown RBP14.79□□□□□ -0.04
NUP50-201ENST00000347635 PCLAFQ15004 111 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 GPSM1Q86YR5 675 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 SVOPQ8N4V2 548 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 FAM156AQ8NDB6 213 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 ATAD3AQ9NVI7 634 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.79□□□□□ -0.04
NUP50-201ENST00000347635 RAD51BO15315 384 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 NPHS1O60500 1241 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 CCNA2P20248 432 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 IFNA8P32881 189 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 CCNFP41002 786 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 SPPL2CQ8IUH8 684 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 AHI1Q8N157 1196 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 MYLPFQ96A32 169 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 ARAP2Q8WZ64 1704 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 NAA20P61599 178 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 TOP3AQ13472 1001 aaPredicted RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 HERC3Q15034 1050 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 TTC23Q5W5X9 447 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 SPPL2BQ8TCT7 592 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 CASP10Q92851 521 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 PLK2Q9NYY3 685 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 TPRKBQ9Y3C4 175 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 CBFA2T3O75081 653 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 MLYCDO95822 493 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 GUCA1CO95843 209 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 T-ENOLP0DO92 83 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 THOP1P52888 689 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 USP46P62068 366 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 IRF5Q13568 498 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 KRR1Q13601 381 aaKnown RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 ARHGAP17Q68EM7 881 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 CDCA2Q69YH5 1023 aaPredicted RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 EPGNQ6UW88 154 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 CAND1Q86VP6 1230 aaKnown RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 PQLC3Q8N755 202 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 PRR11Q96HE9 360 aaPredicted RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 TSEN34Q9BSV6 310 aaKnown RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 EXOSC4Q9NPD3 245 aaKnown RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 C8orf4Q9NR00 106 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 LAMB1P07942 1786 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 TOP3BO95985 862 aaKnown RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 TRIM60Q495X7 471 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 MILR1Q7Z6M3 343 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 ATG16L2Q8NAA4 619 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 GIPC3Q8TF64 312 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 ZBED3Q96IU2 234 aaPredicted RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 SIGLEC10Q96LC7 697 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 OR52B2Q96RD2 323 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 TLL2Q9Y6L7 1015 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 WDR47O94967 919 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 KRT75O95678 551 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 WNT3AP56704 352 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 RUNX1T1Q06455 604 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 PHTF2Q8N3S3 785 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 WDTC1Q8N5D0 677 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 NKAPQ8N5F7 415 aaKnown RBP14.78□□□□□ -0.04
NUP50-201ENST00000347635 FBXO30Q8TB52 745 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 BORCS5Q969J3 196 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 PGLYRP2Q96PD5 576 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 TEX12Q9BXU0 123 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 PARVBQ9HBI1 364 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 IMPAD1Q9NX62 359 aa14.78□□□□□ -0.04
NUP50-201ENST00000347635 C5orf58C9J3I9 102 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 ITGALP20701 1170 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 CDH13P55290 713 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 RHOAP61586 193 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 TNFAIP8L3Q5GJ75 292 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 HECTD3Q5T447 861 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 HECTD2Q5U5R9 776 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 KLHDC10Q6PID8 442 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 DNAJC14Q6Y2X3 702 aaPredicted RBP14.77□□□□□ -0.04
NUP50-201ENST00000347635 CDHR3Q6ZTQ4 885 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 SNX27Q96L92 541 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 COQ10BQ9H8M1 238 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 GOLGA2P5Q9HBQ8 144 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 CBX4O00257 560 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 BUD23O43709 281 aaKnown RBP14.77□□□□□ -0.04
NUP50-201ENST00000347635 IL2P60568 153 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 ARMC3Q5W041 872 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 PROSER1Q86XN7 944 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 AADATQ8N5Z0 425 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 APOL4Q9BPW4 351 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 MKS1Q9NXB0 559 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 SPG21Q9NZD8 308 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 MARCH2Q9P0N8 246 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 ZMYM5Q9UJ78 669 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 ITGB4P16144 1822 aa14.77□□□□□ -0.04
NUP50-201ENST00000347635 STRCP1A6NGW2 1772 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 PEX10O60683 326 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 SOX6P35712 828 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 ZNF252P-AS1Q0IIN9 211 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 ZNF618Q5T7W0 954 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 DPY19L2P1Q6NXN4 242 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms