RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 NAA50Q9GZZ1 169 aaKnown RBP13.28□□□□□ -0.28
COL2A1-201ENST00000337299 CLEC4MQ9H2X3 399 aaPredicted RBP13.28□□□□□ -0.28
COL2A1-201ENST00000337299 ZDHHC7Q9NXF8 308 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 TOR4AQ9NXH8 423 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 COQ3Q9NZJ6 369 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 FBXO5Q9UKT4 447 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 CAPN14A8MX76 684 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 ATE1O95260 518 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 SNAP29O95721 258 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 GUCA1CO95843 209 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 C4BPAP04003 597 aaKnown RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 LTA4HP09960 611 aaKnown RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 SNHG28P0DPA3 235 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 FMO3P31513 532 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 TCF7P36402 384 aaPredicted RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 ETV4P43268 484 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 TRAP1Q12931 704 aaKnown RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 HERC3Q15034 1050 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 MED22Q15528 200 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 ZRANB3Q5FWF4 1079 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 UBE2UQ5VVX9 321 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 IER5Q5VY09 327 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 RAB43Q86YS6 212 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 CDYL2Q8N8U2 506 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 OR8H1Q8NGG4 311 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 ZNF516Q92618 1163 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 NEK6Q9HC98 313 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 ABCB9Q9NP78 766 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 NT5MQ9NPB1 228 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 SMOXQ9NWM0 555 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 LEF1Q9UJU2 399 aaPredicted RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 GIT1Q9Y2X7 761 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 PRKAB1Q9Y478 270 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 DYNC1LI2O43237 492 aaPredicted RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 KRT6BP04259 564 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 SUPT20HL2P0C7V6 817 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 CDH1P12830 882 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 DDX5P17844 614 aaKnown RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 GEMP55040 296 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 EPS8Q12929 822 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 NFATC3Q12968 1075 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 IL18R1Q13478 541 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 TYSND1Q2T9J0 566 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 DUS1LQ6P1R4 473 aaKnown RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 XYLT1Q86Y38 959 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 DDX1Q92499 740 aaKnown RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 GFM1Q96RP9 751 aaKnown RBP13.27□□□□□ -0.28
COL2A1-201ENST00000337299 GAD1Q99259 594 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 IL22Q9GZX6 179 aa13.27□□□□□ -0.28
COL2A1-201ENST00000337299 ADORA2AP29274 412 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 EPHX2P34913 555 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 PABPC1LQ4VXU2 614 aaKnown RBP13.27□□□□□ -0.29
COL2A1-201ENST00000337299 MRNIPQ6NTE8 343 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 IL27RAQ6UWB1 636 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 LDB1Q86U70 411 aaPredicted RBP13.27□□□□□ -0.29
COL2A1-201ENST00000337299 NT5DC4Q86YG4 428 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 PYROXD2Q8N2H3 581 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 GMCL1P1Q8NEA9 526 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 MUS81Q96NY9 551 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 PGLYRP2Q96PD5 576 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 BEX2Q9BXY8 128 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 TUT1Q9H6E5 874 aaKnown RBP13.27□□□□□ -0.29
COL2A1-201ENST00000337299 ZFP14Q9HCL3 533 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 FBXO9Q9UK97 447 aaPredicted RBP13.27□□□□□ -0.29
COL2A1-201ENST00000337299 OGDHLQ9ULD0 1010 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 CROCCQ5TZA2 2017 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 LTN1O94822 1766 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 IGLV3-22A0A075B6J6 115 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 AIREO43918 545 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 FYNP06241 537 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 ANXA6P08133 673 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 MYL3P08590 195 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 GNAO1P09471 354 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 ACADSBP45954 432 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 MEP1AQ16819 746 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF284Q2VY69 593 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 CACHD1Q5VU97 1274 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 METTL23Q86XA0 190 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 GALNT12Q8IXK2 581 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 ZC3H3Q8IXZ2 948 aaKnown RBP13.27□□□□□ -0.29
COL2A1-201ENST00000337299 Q8N9G6 341 aaPredicted RBP13.27□□□□□ -0.29
COL2A1-201ENST00000337299 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 RHOJQ9H4E5 214 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 FBRSL1Q9HCM7 1045 aaKnown RBP13.27□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF224Q9NZL3 707 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 GIMAP2Q9UG22 337 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 RAPGEFL1Q9UHV5 662 aa13.27□□□□□ -0.29
COL2A1-201ENST00000337299 FARP1Q9Y4F1 1045 aaPredicted RBP13.27□□□□□ -0.29
COL2A1-201ENST00000337299 H3BMQ9 156 aa13.26□□□□□ -0.29
COL2A1-201ENST00000337299 SOCS2O14508 198 aa13.26□□□□□ -0.29
COL2A1-201ENST00000337299 CCNE2O96020 404 aa13.26□□□□□ -0.29
COL2A1-201ENST00000337299 NFICP08651 508 aa13.26□□□□□ -0.29
COL2A1-201ENST00000337299 CNPP09543 421 aaKnown RBP13.26□□□□□ -0.29
COL2A1-201ENST00000337299 MSH3P20585 1137 aa13.26□□□□□ -0.29
COL2A1-201ENST00000337299 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
COL2A1-201ENST00000337299 PTGS2P35354 604 aa13.26□□□□□ -0.29
COL2A1-201ENST00000337299 HNRNPDQ14103 355 aaKnown RBP13.26□□□□□ -0.29
COL2A1-201ENST00000337299 QPRTQ15274 297 aa13.26□□□□□ -0.29
COL2A1-201ENST00000337299 C9orf131Q5VYM1 1079 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms