RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 SLC1A2P43004 574 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 MAZP56270 477 aaKnown RBP12.7□□□□□ -0.38
KPNA4-201ENST00000334256 NOMO2Q5JPE7 1267 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 STRA8Q7Z7C7 330 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 OR2AJ1Q8NGZ0 328 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 RORBQ92753 470 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 S100PBPQ96BU1 408 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 KLHL4Q9C0H6 718 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 BLOC1S4Q9NUP1 217 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 KLRF1Q9NZS2 232 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 TUBGCP4Q9UGJ1 667 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 TFR2Q9UP52 801 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 SH3PXD2BA1X283 911 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 CARNS1A5YM72 827 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 MAGEA13PA6NCF6 341 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 CIAO1O76071 339 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 ACTL6BO94805 426 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 INSRRP14616 1297 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 TAB1Q15750 504 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 DPY19L4Q7Z388 723 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 OR5T1Q8NG75 326 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 EZH1Q92800 747 aaPredicted RBP12.7□□□□□ -0.38
KPNA4-201ENST00000334256 KLQ9UEF7 1012 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 IQCF5A8MTL0 148 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 PIRTP0C851 137 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 ARCN1P48444 511 aaKnown RBP12.7□□□□□ -0.38
KPNA4-201ENST00000334256 GXYLT1Q4G148 440 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 ARHGAP40Q5TG30 622 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 WDR93Q6P2C0 686 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 CES3Q6UWW8 571 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 ZNF589Q86UQ0 364 aaPredicted RBP12.7□□□□□ -0.38
KPNA4-201ENST00000334256 FRMD8P1Q9BZ68 369 aaPredicted RBP12.7□□□□□ -0.38
KPNA4-201ENST00000334256 CCDC86Q9H6F5 360 aaKnown RBP12.7□□□□□ -0.38
KPNA4-201ENST00000334256 METTL8Q9H825 291 aaKnown RBP12.7□□□□□ -0.38
KPNA4-201ENST00000334256 MDH1P40925 334 aaKnown RBP12.7□□□□□ -0.38
KPNA4-201ENST00000334256 ADARP55265 1226 aaKnown RBP12.7□□□□□ -0.38
KPNA4-201ENST00000334256 STK11Q15831 433 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 MEIOBQ8N635 442 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 HES7Q9BYE0 225 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 CROCCQ5TZA2 2017 aa12.7□□□□□ -0.38
KPNA4-201ENST00000334256 OAZ2O95190 189 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 GALK2Q01415 458 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CREMQ03060 361 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 ZNF484Q5JVG2 852 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 PLEKHG4BQ96PX9 1271 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 PANX3Q96QZ0 392 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CLCN7P51798 805 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 SLC12A3P55017 1021 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 NAE1Q13564 534 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 QPRTQ15274 297 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 LRRC73Q5JTD7 316 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 SLC25A25Q6KCM7 469 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 FIP1L1Q6UN15 594 aaKnown RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 LIX1LQ8IVB5 337 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 TOR1AIP2Q8NFQ8 470 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 C3orf49Q96BT1 292 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 RBM18Q96H35 190 aaKnown RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CHN2P52757 468 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 RUNDC3AQ59EK9 446 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 FAM110BQ8TC76 370 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CNDP2Q96KP4 475 aaKnown RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 HGH1Q9BTY7 390 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 A1CFQ9NQ94 594 aaKnown RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 TRPV5Q9NQA5 729 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 COMMD8Q9NX08 183 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 PACSIN3Q9UKS6 424 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 NCANO14594 1321 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 RFX7Q2KHR2 1363 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 MANFP55145 182 aaKnown RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 FPGSQ05932 587 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 MZT2BQ6NZ67 158 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 NPLOC4Q8TAT6 608 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 POLR1EQ9GZS1 481 aaKnown RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 EHD1Q9H4M9 534 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 SYNGR4O95473 234 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 RPL6Q02878 288 aaKnown RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 ZNF844Q08AG5 666 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 OR8H3Q8N146 312 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 TRIM64CA6NLI5 447 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CCDC188H7C350 402 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 PUM1Q14671 1186 aaKnown RBP eCLIP12.69□□□□□ -0.384e-6■■■■□ 19.5
KPNA4-201ENST00000334256 PKN1Q16512 942 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 EIF3MQ7L2H7 374 aaKnown RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 NUP54Q7Z3B4 507 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 LRRC17Q8N6Y2 441 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 PRMT6Q96LA8 375 aaPredicted RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CCDC28BQ9BUN5 200 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CNOT6Q9ULM6 557 aaKnown RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 GAKO14976 1311 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 JCADQ9P266 1359 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CRYBA1P05813 215 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CYP11B1P15538 503 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 TAL1P17542 331 aaPredicted RBP12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CCNE1P24864 410 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 C9orf152Q5JTZ5 239 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 UBQLNLQ8IYU4 475 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 DHRSXQ8N5I4 330 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 OR4K17Q8NGC6 315 aa12.69□□□□□ -0.38
KPNA4-201ENST00000334256 CST11Q9H112 138 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms