RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 ZNF180Q9UJW8 692 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 EEF1B2P24534 225 aaKnown RBP13.64□□□□□ -0.23
SRRM1-201ENST00000323848 ST8SIA6P61647 398 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 ADAM17P78536 824 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 CPNE9Q8IYJ1 553 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 FNDC5Q8NAU1 212 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 KYQ8NBH2 561 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 OR9I1Q8NGQ6 314 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 NAF1Q96HR8 494 aaKnown RBP13.64□□□□□ -0.23
SRRM1-201ENST00000323848 HGH1Q9BTY7 390 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 TLR9Q9NR96 1032 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.64□□□□□ -0.237e-7■□□□□ 9.8
SRRM1-201ENST00000323848 COCHO43405 550 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 RASSF9O75901 435 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 APOA4P06727 396 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 HIST1H2AGP0C0S8 130 aaPredicted RBP13.64□□□□□ -0.23
SRRM1-201ENST00000323848 THRAP10827 490 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 COX4I1P13073 169 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 HIST1H2ADP20671 130 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 NFKBIAP25963 317 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 IDH3AP50213 366 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 NRF1Q16656 503 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 LSM12Q3MHD2 195 aaKnown RBP13.64□□□□□ -0.23
SRRM1-201ENST00000323848 LPCAT4Q643R3 524 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 CLHC1Q8NHS4 586 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 HIST1H2AHQ96KK5 128 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 HIST1H2AJQ99878 128 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 H2AFJQ9BTM1 129 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 EFCAB1Q9HAE3 211 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 FBRSL1Q9HCM7 1045 aaKnown RBP13.64□□□□□ -0.23
SRRM1-201ENST00000323848 SPG21Q9NZD8 308 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 ZDHHC2Q9UIJ5 367 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 YIPF1Q9Y548 306 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 PTGDR2Q9Y5Y4 395 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 ATAD5Q96QE3 1844 aa13.64□□□□□ -0.23
SRRM1-201ENST00000323848 SRRM3A6NNA2 597 aaPredicted RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 SYN3O14994 580 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 SORBS2O94875 1100 aaKnown RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 NEK3P51956 506 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 PCLAFQ15004 111 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 DOK6Q6PKX4 331 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 PAQR3Q6TCH7 311 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 RSPO2Q6UXX9 243 aaPredicted RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 BNC2Q6ZN30 1099 aaPredicted RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 SIDT2Q8NBJ9 832 aaKnown RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 CEP70Q8NHQ1 597 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 LINGO1Q96FE5 620 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 CNBD2Q96M20 576 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 HPS4Q9NQG7 708 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 SLC12A4Q9UP95 1085 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 RP1L1Q8IWN7 2480 aaPredicted RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 UNCXA6NJT0 531 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 F8W8V4 182 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 AGRPO00253 132 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 TLL1O43897 1013 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 PARNO95453 639 aaKnown RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 C8AP07357 584 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 ATP5F1P24539 256 aaPredicted RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 EEF1DP29692 281 aaKnown RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 CDKN1CP49918 316 aaPredicted RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 SLC18A2Q05940 514 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 GPR17Q13304 367 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 LACTB2Q53H82 288 aaPredicted RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 TMC5Q6UXY8 1006 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 ADCK2Q7Z695 626 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 FCRL5Q96RD9 977 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 SHROOM3Q8TF72 1996 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 DLX3O60479 287 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 RFPL2O75678 378 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 DLDP09622 509 aaKnown RBP13.63□□□□□ -0.23
SRRM1-201ENST00000323848 ITGALP20701 1170 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 CSKP41240 450 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 AIF1P55008 147 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 CPSF6Q16630 551 aaKnown RBP eCLIP13.63□□□□□ -0.238e-10■□□□□ 9.4
SRRM1-201ENST00000323848 C11orf96Q7Z7L8 435 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 CUZD1Q86UP6 607 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 FIBCD1Q8N539 461 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 SLC45A3Q96JT2 553 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 MRGPRX2Q96LB1 330 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 KCNA7Q96RP8 456 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 SPATA16Q9BXB7 569 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 CDH19Q9H159 772 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 BCAP29Q9UHQ4 241 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 C15orf41Q9Y2V0 281 aa13.63□□□□□ -0.23
SRRM1-201ENST00000323848 SYNDIG1LA6NDD5 238 aa13.62□□□□□ -0.23
SRRM1-201ENST00000323848 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.62□□□□□ -0.23
SRRM1-201ENST00000323848 OR1I1O60431 355 aa13.62□□□□□ -0.23
SRRM1-201ENST00000323848 SMNDC1O75940 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
SRRM1-201ENST00000323848 HGFP14210 728 aa13.62□□□□□ -0.23
SRRM1-201ENST00000323848 LPOP22079 712 aaPredicted RBP13.62□□□□□ -0.23
SRRM1-201ENST00000323848 PPP3CCP48454 512 aa13.62□□□□□ -0.23
SRRM1-201ENST00000323848 DEFB103AP81534 67 aa13.62□□□□□ -0.23
SRRM1-201ENST00000323848 MED8Q96G25 268 aa13.62□□□□□ -0.23
SRRM1-201ENST00000323848 OLFM3Q96PB7 478 aa13.62□□□□□ -0.23
SRRM1-201ENST00000323848 C2orf49Q9BVC5 232 aaPredicted RBP13.62□□□□□ -0.23
SRRM1-201ENST00000323848 OSBPL2Q9H1P3 480 aa13.62□□□□□ -0.23
SRRM1-201ENST00000323848 MOCS1Q9NZB8 636 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms