RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 TRMOQ9BU70 441 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 KIF17Q9P2E2 1029 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 OR51F1A6NGY5 319 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 J3KR12 359 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 TRIM38O00635 465 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 CLDN11O75508 207 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 CCND3P30281 292 aaPredicted RBP13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 LPIN1Q14693 890 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 ZBTB6Q15916 424 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 DEFB115Q30KQ5 88 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 ARHGAP15Q53QZ3 475 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 ACBD5Q5T8D3 534 aaPredicted RBP13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 WLSQ5T9L3 541 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 FBXL22Q6P050 247 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 MILR1Q7Z6M3 343 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 SERINC5Q86VE9 423 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 FAM126BQ8IXS8 530 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 NPWQ8N729 165 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 CDYL2Q8N8U2 506 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 SH3KBP1Q96B97 665 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 SKA1Q96BD8 255 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 ZNF558Q96NG5 402 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 SPAG4Q9NPE6 437 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 OXSMQ9NWU1 459 aa13.45□□□□□ -0.26
PCDHB9-201ENST00000316105 ACSL4O60488 711 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 C1RP00736 705 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 LINC00032P0C843 101 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 TMEM198Q66K66 360 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 PRMT9Q6P2P2 845 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 LINGO4Q6UY18 593 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 TMEM79Q9BSE2 394 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 CIPCQ9C0C6 399 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 FLRT1Q9NZU1 646 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 GABRQQ9UN88 632 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 AP4S1Q9Y587 144 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 PCDHGC4Q9Y5F7 938 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 ZNF839A8K0R7 811 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 BHMG1C9JSJ3 638 aaPredicted RBP13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 ALBP02768 609 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 GRIA3P42263 894 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 CHRNB3Q05901 458 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 IL10RBQ08334 325 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 SMARCB1Q12824 385 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 BOP1Q14137 746 aaKnown RBP13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 CGB2Q6NT52 195 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 WDR60Q8WVS4 1066 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 CCDC28BQ9BUN5 200 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 ELOVL6Q9H5J4 265 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 CACYBPQ9HB71 228 aaKnown RBP13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 TBX10O75333 385 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 VPS4BO75351 444 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 GOT2P00505 430 aaKnown RBP13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 FASP25445 335 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 CCNFP41002 786 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 PABPC1LQ4VXU2 614 aaKnown RBP13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 TNFAIP8L3Q5GJ75 292 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 OR10T2Q8NGX3 314 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 LINGO1Q96FE5 620 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 PTPN18Q99952 460 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 PAIP2BQ9ULR5 123 aaKnown RBP13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 BRWD3Q6RI45 1802 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 C1orf232A0A0U1RR37 186 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 SLC7A4O43246 635 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 CAPN15O75808 1086 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 FKBP9O95302 570 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 FAM58BPP0C7Q3 252 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 FGF3P11487 239 aaPredicted RBP13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 TAZQ16635 292 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 CYP51A1Q16850 503 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 FKBP9P1Q75LS8 142 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 B4GALNT2Q8NHY0 566 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 OR52B2Q96RD2 323 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 GPR22Q99680 433 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 RHBDL2Q9NX52 303 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 PLK2Q9NYY3 685 aa13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 ZFP37Q9Y6Q3 630 aaPredicted RBP13.44□□□□□ -0.26
PCDHB9-201ENST00000316105 KANSL1LA0AUZ9 987 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 EVPLLA8MZ36 301 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 MYO1GB0I1T2 1018 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 CHRNA1P02708 482 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 ATP6V0D1P61421 351 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 TREML1Q86YW5 311 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 TRIB2Q92519 343 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 PRR11Q96HE9 360 aaPredicted RBP13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 EMILIN2Q9BXX0 1053 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 DPY30Q9C005 99 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 TMEM161AQ9NX61 479 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 AMHP03971 560 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 MAPKAPK2P49137 400 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 SLC7A2P52569 658 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 PKDCCQ504Y2 493 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 ZNF280BQ86YH2 543 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 DNAJB14Q8TBM8 379 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 STYXQ8WUJ0 223 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 C1orf50Q9BV19 199 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 MTMR10Q9NXD2 777 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 MTF2Q9Y483 593 aaPredicted RBP13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 RAI2Q9Y5P3 530 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 TMEM88BA6NKF7 163 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms