RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 UBXN8O00124 270 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 RFXANKO14593 260 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 BCKDKO14874 412 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 SUV39H1O43463 412 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 GUCY1B2O75343 617 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 FADS2O95864 444 aaKnown RBP11.06□□□□□ -0.64
PBRM1-201ENST00000296302 ITGAXP20702 1163 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 CCR3P51677 355 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 SLC5A3P53794 718 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 P2RY8Q86VZ1 359 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 ERI1Q8IV48 349 aaKnown RBP11.06□□□□□ -0.64
PBRM1-201ENST00000296302 SLC4A11Q8NBS3 891 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 TRAPPC12Q8WVT3 735 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 ZNF317Q96PQ6 595 aaPredicted RBP11.06□□□□□ -0.64
PBRM1-201ENST00000296302 ADI1Q9BV57 179 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 C12orf65Q9H3J6 166 aaKnown RBP11.06□□□□□ -0.64
PBRM1-201ENST00000296302 STXBP5LQ9Y2K9 1186 aa11.06□□□□□ -0.64
PBRM1-201ENST00000296302 IRGMA1A4Y4 181 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 TBX10O75333 385 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 TULP3O75386 442 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 LGR5O75473 907 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ZNF286BP0CG31 522 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 CREB1P16220 341 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 IDH3AP50213 366 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 LIMK2P53671 638 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 RHBDL3P58872 404 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 TUBA4AP68366 448 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 GNA13Q14344 377 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ASTE1Q2TB18 679 aaPredicted RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 PTPN20Q4JDL3 420 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ARL13AQ5H913 290 aaPredicted RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 STRADAQ7RTN6 431 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 APTXQ7Z2E3 356 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 TRMT11Q7Z4G4 463 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 MOSPD2Q8NHP6 518 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 PANX1Q96RD7 426 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 COMMD9Q9P000 198 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 VPS4AQ9UN37 437 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 NR2E1Q9Y466 385 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 SPATA31A5Q5VU36 1347 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 SPATA31A7Q8IWB4 1347 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ARHGAP23Q9P227 1491 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 FFAR3O14843 346 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 TFECO14948 347 aaPredicted RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 GPR42O15529 346 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 DYRK3O43781 588 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 RNASEH1O60930 286 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 MAFO75444 373 aaPredicted RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 GUCA1AP43080 201 aaPredicted RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 CDH13P55290 713 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 SPIBQ01892 262 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 LIN54Q6MZP7 749 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 SCIMPQ6UWF3 145 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 FAM131AQ6UXB0 335 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 LRTOMTQ8WZ04 291 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 SENP8Q96LD8 212 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 GPATCH1Q9BRR8 931 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 CDT1Q9H211 546 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 KANSL3Q9P2N6 904 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 VPS51Q9UID3 782 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 TELO2Q9Y4R8 837 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 DGKBQ9Y6T7 804 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 RECQL4O94761 1208 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 IGFBP5P24593 272 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 WDR4P57081 412 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 FKBP1AP62942 108 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ELP6Q0PNE2 266 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 RALGPS1Q5JS13 557 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 REP15Q6BDI9 236 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 PIK3C3Q8NEB9 887 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 PTCD2Q8WV60 388 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ZFAND2BQ8WV99 257 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 USP7Q93009 1102 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 NODALQ96S42 347 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 KIFC1Q9BW19 673 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 MRPS7Q9Y2R9 242 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 TRIM17Q9Y577 477 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 TPD52L2O43399 206 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ZBTB7AO95365 584 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ANGPTL1O95841 491 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 RPN2P04844 631 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 CYP4B1P13584 511 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 IL18R1Q13478 541 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 VWA5B1Q5TIE3 1220 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ANO7Q6IWH7 933 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 C15orf52Q6ZUT6 534 aaKnown RBP11.05□□□□□ -0.64
PBRM1-201ENST00000296302 ZNF438Q7Z4V0 828 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 PLEKHH3Q7Z736 793 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 PLD5Q8N7P1 536 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 OR52L1Q8NGH7 329 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 SDCBP2Q9H190 292 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 OGDHLQ9ULD0 1010 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 PCDHGC3Q9UN70 934 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 PEX16Q9Y5Y5 336 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 NID2Q14112 1375 aa11.05□□□□□ -0.64
PBRM1-201ENST00000296302 PSMD11O00231 422 aa11.04□□□□□ -0.64
PBRM1-201ENST00000296302 KPNA5O15131 536 aa11.04□□□□□ -0.64
PBRM1-201ENST00000296302 KPNA6O60684 536 aa11.04□□□□□ -0.64
PBRM1-201ENST00000296302 LRCH4O75427 683 aa11.04□□□□□ -0.64
PBRM1-201ENST00000296302 BDNFP23560 247 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms