RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 DdnQ80TS7 710 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Dtx3Q80V91 347 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Zbtb46Q8BID6 600 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Wdr59Q8C0M0 992 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Csnk1g3Q8C4X2 424 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 OafQ8QZR4 282 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cdt1Q8R4E9 557 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Olfr1250Q8VGM3 314 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Snx4Q91YJ2 450 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Znf639Q99KZ6 485 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Mrpl54Q9CPW3 135 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Decr1Q9CQ62 335 aaKnown RBP9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Kctd4Q9D7X1 259 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Rnf6Q9DBU5 667 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Dnajb2Q9QYI5 324 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Azi2Q9QYP6 405 aa9.77□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Lamb2Q61292 1799 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Zfp973A2BE20 318 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Xlr4aA2BI40 215 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Supt3B0QZW4 406 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Pramef20B1ARV6 477 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Rnf217D3YYI7 515 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Slc4a9E9PUP3 929 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Spaca6E9Q8Q8 339 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Vmn2r46L7N282 809 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Serpinb9O08797 374 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Apex1P28352 317 aaKnown RBP9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Igfbp3P47878 292 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Spata18Q0P557 537 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Fcho2Q3UQN2 809 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Zmat1Q3V0C1 714 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Meis1Q60954 390 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Abcd2Q61285 741 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 PigaQ64323 485 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Podnl1Q6P3Y9 559 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Magee1Q6PCZ4 918 aaKnown RBP9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Nemp1Q6ZQE4 437 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Dna2Q6ZQJ5 1062 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gpr101Q80T62 511 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Sel1l3Q80TS8 1137 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 SnupnQ80W37 358 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Prickle2Q80Y24 845 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Mboat7Q8CHK3 473 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Batf2Q8R1H8 277 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Lsm1Q8VC85 133 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Olfr808Q8VGI8 312 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Olfr669Q8VGU9 317 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Lims2Q91XD2 341 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 SmoxQ99K82 555 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Itfg1Q99KW9 610 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Snx5Q9D8U8 404 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Suv39h2Q9EQQ0 477 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 P2ry14Q9ESG6 338 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cpsf3Q9QXK7 684 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Copg1Q9QZE5 874 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Ubqln2Q9QZM0 638 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 H2afyQ9QZQ8 372 aaKnown RBP9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gria3Q9Z2W9 888 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gm5114W4VSN8 858 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Rap1gapA2ALS5 663 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Adgrf2E9Q4J9 644 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Rgs7O54829 469 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Mtnd4P03911 459 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cdk1P11440 297 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 AmhP27106 555 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gdf10P97737 476 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Fam83fQ3UKU4 495 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Ugt3a1Q3UP75 523 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Kctd1Q5M956 257 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Eps15l1Q60902 907 aaKnown RBP9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Sh3d21Q7TSG5 549 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Vmn2r81Q80Z09 865 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Smyd4Q8BTK5 799 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Znf786Q8BV42 777 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Sept11Q8C1B7 431 aaKnown RBP9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Slc5a1Q8C3K6 665 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Q8CDN1 933 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Tesk2Q8VCT9 570 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Alg9Q8VDI9 611 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Taf12Q8VE65 161 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Spns2Q91VM4 549 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Slc35b2Q91ZN5 431 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Pla2g12bQ99P27 195 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Abcb8Q9CXJ4 717 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Actl11Q9D5V1 1207 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 P2yr13Q9D8I2 337 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Ddi1Q9DAF3 408 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Nufip1Q9QXX8 484 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 CdylQ9WTK2 593 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Mtm1Q9Z2C5 603 aa9.76□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Nup188Q6ZQH8 1759 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Shank3Q4ACU6 1730 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gucy2dA0A0U1RPR8 1117 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Rpl9-ps6A0A140T8T4 192 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Ttll8A4Q9F1 832 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 SelenonD3Z2R5 557 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Chst13D3Z6E3 336 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Olfr172E9Q8F6 309 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Spata31E9QAF0 1014 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gm10563F6WIE4 79 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms