RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Vnn3Q9QZ25 500 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Dpp6Q9Z218 804 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ncor2Q9WU42 2472 aaKnown RBP12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Wdr49A0A0N4SUK7 710 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tubb1A2AQ07 451 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cldn34b1B1AZQ8 209 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 MlxO08609 298 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ube3aO08759 870 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Pold2O35654 469 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Per3O70361 1113 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 MyogP12979 224 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 SpnP15702 395 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 AmhP27106 555 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Gjc1P28229 396 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ceacam1P31809 521 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cdx2P43241 311 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Lhx1P63006 406 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 A1bgQ19LI2 512 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Pyroxd1Q3TMV7 498 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Eef2kmtQ3UZW7 335 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Adam9Q61072 845 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Fzd3Q61086 666 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Sdf4Q61112 361 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ostf1Q62422 215 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 CcncQ62447 283 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ubfd1Q78JW9 368 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Defb14Q7TNV9 67 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Wnk4Q80UE6 1222 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 H2-M10.5Q85ZW7 330 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Q8BGK9 164 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Haus1Q8BHX1 278 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tbc1d17Q8BYH7 645 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Slc13a4Q8BZ82 625 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Slc39a13Q8BZH0 361 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Pias2Q8C5D8 621 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ccdc159Q8C963 411 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cfap61Q8CEL2 1252 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Dennd1cQ8CFK6 786 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 OafQ8QZR4 282 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Olfr459Q924H8 314 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Edem1Q925U4 652 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Retreg3Q9CQV4 466 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 ProzQ9CQW3 399 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Fam114a1Q9D281 569 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Desi2Q9D291 194 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cldn34b2Q9D9N2 209 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Spag4Q9JJF2 443 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Nova1Q9JKN6 507 aaKnown RBP12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 AicdaQ9WVE0 198 aa12.17□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Lekr1B2RVN1 116 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Zfp780bE9Q2S6 806 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cxcr3O88410 367 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Sycp3P70281 254 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Aup1P70295 410 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 SgcgP82348 291 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 AurkaP97477 395 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Mmp7Q10738 264 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Q3TYS2 187 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ddx3yQ62095 658 aaKnown RBP12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Casc4Q6P2L7 435 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Xylt1Q811B1 953 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Zbtb41Q811F1 908 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tmem184bQ8BG09 407 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Znf770Q8BIQ8 705 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ccdc87Q8CDL9 855 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tmem150bQ8R218 238 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Slc22a6Q8VC69 545 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Elf5Q8VDK3 253 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 ApofQ91V80 315 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Lrp8Q924X6 996 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 2010005H15RikQ9D8D6 97 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Rai2Q9QVY8 529 aa12.16□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Rrn3B2RS91 656 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Catsperg2C6KI89 1145 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Atf6F6VAN0 656 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Kcng2F7A6P6 480 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Vmn1r39G3UWE6 305 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Stc1O55183 247 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Srpk1O70551 648 aaKnown RBP12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 AvilO88398 819 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Fpr-rs3O88537 343 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Gstm1P10649 218 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ms4a1P19437 291 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 PdgfraP26618 1089 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tead1P30051 426 aaKnown RBP12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ccr7P47774 378 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Defa-rs7P50715 91 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Hsd17b4P51660 735 aaKnown RBP12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 HnrnpkP61979 463 aaKnown RBP12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Mc1rQ01727 315 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ccdc114Q3UX62 658 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Lamb3Q61087 1168 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Hsd3b5Q61694 373 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Irf4Q64287 450 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Map3k10Q66L42 940 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 PianpQ6P1B3 278 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Snx31Q6P8Y7 439 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tas2r102Q7M717 329 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Eif2aQ8BJW6 581 aaKnown RBP12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Clasp2Q8BRT1 1286 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms