RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Rab36Q8CAM5 267 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Dclre1cQ8K4J0 705 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 CtbsQ8R242 366 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Tspan33Q8R3S2 283 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Lyrm1Q9CQB7 122 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Trmt11Q9CWH5 460 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Cdkn2aipnlQ9D211 116 aaKnown RBP16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Phf11A6H5X4 337 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Ccdc62E9PVD1 701 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Pou5f1P20263 352 aaKnown RBP16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Pcbp1P60335 356 aaKnown RBP16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Stx1bP61264 288 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 OxtrP97926 388 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Col28a1Q2UY11 1141 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 MogQ61885 246 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 XpaQ64267 272 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Gba2Q69ZF3 918 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Stmnd1Q6P3A1 279 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Snx32Q80ZJ7 404 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Noc4lQ8BHY2 516 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Serpina3bQ8BYY9 420 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Slfn5Q8CBA2 884 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Pcdhb11Q91UZ8 797 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Sec16bQ91XT4 1051 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Kif12Q9D2Z8 642 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Mpp6Q9JLB0 553 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Zscan12Q9Z1D7 501 aa16.41■□□□□ 0.22
Trim8-201ENSMUST00000026008 Zscan4eA0A1B0GRE8 505 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Gm3164L7N2B9 238 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Lrig1P70193 1091 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Ceacam5Q3UKK2 947 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Avpr1aQ62463 423 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 DazlQ64368 298 aaKnown RBP16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Pcdh20Q8BIZ0 952 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Snx8Q8CFD4 459 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Acsm2Q8K0L3 575 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 GneQ91WG8 722 aaKnown RBP16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 S100pbpQ9D5K4 396 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Socs2O35717 198 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Serpinb2P12388 415 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Slc11a2P49282 568 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Serpina5P70458 405 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Slc45a4Q0P5V9 785 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Slc16a10Q3U9N9 512 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Tmem102Q3UPR7 509 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Rabl6Q5U3K5 725 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Dyrk2Q5U4C9 599 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Nr1h2Q60644 446 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Olfr295Q7TS08 309 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 SvopQ8BFT9 548 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Zcchc4Q8BKW4 512 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Gpr21Q8BX79 349 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Pcolce2Q8R4W6 414 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 4930524N10RikQ9D519 233 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 H2afb2S4R1M3 115 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 1600015I10RikE9Q745 711 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 F830016B08RikG3UWE2 416 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Sh3pxd2aO89032 1124 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 P01652 108 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Defa8P50706 81 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Jak1P52332 1153 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Fam171bQ14CH0 825 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Syce1lQ5D525 247 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Hspa1aQ61696 641 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Hmgxb4Q80Y32 594 aaKnown RBP16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Nup54Q8BTS4 510 aaKnown RBP16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Crtc3Q91X84 619 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Nck1Q99M51 377 aa16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Celf2Q9Z0H4 508 aaKnown RBP16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Bag6Q9Z1R2 1154 aaKnown RBP16.4■□□□□ 0.22
Trim8-201ENSMUST00000026008 Gm45713A0A1B0GS68 446 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Krt4P07744 525 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 ArsaP50428 506 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Hoxb13P70321 286 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Tmem80Q9D3H0 123 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 D7h11orf16Q9JJR6 402 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Znhit2Q9QY66 399 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Ralgapa2A3KGS3 1872 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Supt3B0QZW4 406 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Tpst2O88856 376 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Slc2a3P32037 493 aaKnown RBP16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 AxlQ00993 888 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Smpd1Q04519 627 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Axdnd1Q3UZ57 424 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Sox17Q61473 419 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Ip6k1Q6PD10 433 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Mterf2Q8BKY8 385 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Ipo13Q8K0C1 963 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Gspt1Q8R050 636 aaKnown RBP16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Ddx50Q99MJ9 734 aaKnown RBP16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Dlgap1Q9D415 992 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 MkksQ9JI70 570 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Cacng3Q9JJV5 315 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Cyhr1Q9QXA1 311 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Actl7aQ9QY84 440 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 Cep350E9Q309 3095 aa16.39■□□□□ 0.21
Trim8-201ENSMUST00000026008 LctF8VPT3 1931 aa16.38■□□□□ 0.21
Trim8-201ENSMUST00000026008 Ccdc194A0A140LIT1 234 aa16.38■□□□□ 0.21
Trim8-201ENSMUST00000026008 Gm3383J3QQ59 259 aa16.38■□□□□ 0.21
Trim8-201ENSMUST00000026008 Gm3239L7N2D9 227 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms