RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Zfp617Q91WM0 559 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Mrps2Q924T2 291 aaKnown RBP9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 DhddsQ99KU1 333 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 St7Q99M96 577 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Pramel1Q99MW3 458 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Chaf1bQ9D0N7 572 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Clcn5Q9WVD4 746 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Dctn3Q9Z0Y1 186 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Mtcl1Q3UHU5 1945 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 SmoktcrA2KF29 484 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Zscan5bB2RTN3 468 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Zfp780bE9Q2S6 806 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gm5160F8VPN3 147 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Olfr596F8VQ26 312 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Vmn2r67K7N6T2 851 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 HunkO88866 714 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gdf6P43028 454 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Zfp607aQ3TQG9 686 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Serac1Q3U213 654 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Lrrc8bQ5DU41 803 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Defa17Q64016 82 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Zc4h2Q68FG0 224 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 ErfeQ6PGN1 340 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Paqr6Q6TCG5 343 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tmem209Q8BRG8 561 aaKnown RBP9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 UstQ8BUB6 407 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tigd4Q8BUZ3 513 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Camk1dQ8BW96 385 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Snx16Q8C080 344 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Slco4a1Q8K078 723 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Impg1Q8R1W8 798 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 McmbpQ8R3C0 642 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Smg8Q8VE18 991 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Setd7Q8VHL1 366 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Rsl24d1Q99L28 163 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 ProzQ9CQW3 399 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Cpxm2Q9D2L5 764 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Kif12Q9D2Z8 642 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tlr6Q9EPW9 795 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Abcb9Q9JJ59 762 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Cyb561d2Q9WUE3 222 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Rps6kb2Q9Z1M4 485 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Zscan4eA0A1B0GRE8 505 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Phf11A6H5X4 337 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Cylc2B1AWN8 422 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Azin1O35484 448 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Stx7O70439 261 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Slc6a20bO88575 635 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Il12aP43431 215 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gp1bbP56400 206 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Fbp2P70695 339 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 SPINDOCQ05AH6 381 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Ulk3Q3U3Q1 472 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Mthfd1lQ3V3R1 977 aaKnown RBP9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Rab26Q504M8 260 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Olfr463Q5SW49 311 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Olfr462Q5SW50 311 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Cpa4Q6P8K8 420 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tas2r131Q7M708 310 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 WtipQ7TQJ8 398 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Noc4lQ8BHY2 516 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Ago3Q8CJF9 860 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 HnrnplQ8R081 586 aaKnown RBP9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Oit3Q8R4V5 546 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Slc6a20aQ8VDB9 592 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Oas1cQ924S2 362 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Capn10Q9ESK3 666 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Rpl9-ps1S4R1R7 191 aa9.5□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Akap17bA2A3V1 959 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 CercamA3KGW5 592 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gm3752A6NAT4 150 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gm3248K7N721 186 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Kifc3O35231 824 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Cd2P08920 344 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Acot8P58137 320 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Ccdc185Q3V118 621 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Ephx4Q6IE26 359 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 AtminQ6P9S1 818 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Dna2Q6ZQJ5 1062 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Ifi44Q8BV66 422 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gpr21Q8BX79 349 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tp53bp2Q8CG79 1128 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Wdr11Q8K1X1 1223 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 B4galt3Q91YY2 395 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Lrrc17Q9CXD9 443 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Dock5B2RY04 1868 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Ssxb6A2BI74 170 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gm10717D3Z1I8 228 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Adamts14E9PX39 1209 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gm8237E9Q257 205 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Angpt2O35608 496 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Htr5bP31387 370 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Rnf19aP50636 840 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Hsd11b2P51661 386 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Cdh6P97326 790 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Adra1dP97714 562 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Pag1Q3U1F9 429 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Glp2rQ5IXF8 512 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Mrm3Q5ND52 418 aa9.49□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Ifi47Q61635 420 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms