RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SOHLH2Q9NX45 425 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 DTLQ9NZJ0 730 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 DNMT3LQ9UJW3 386 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PSAT1Q9Y617 370 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CCDC189A1A4V9 331 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 HMX2A2RU54 273 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 MAGEA13PA6NCF6 341 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 FAM159BA6NKW6 160 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 SEPT4O43236 478 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 GLRA3O75311 464 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 ATP6V1B1P15313 513 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 LMO2P25791 158 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 FLOT2Q14254 428 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CNGA3Q16281 694 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 NEPROQ6NW34 567 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PSRC1Q6PGN9 363 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TMCO2Q7Z6W1 182 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 ANKRD23Q86SG2 305 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CAMKK1Q8N5S9 505 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 VPS50Q96JG6 964 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 SEPHS2Q99611 448 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TRIM15Q9C019 465 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 ABCG4Q9H172 646 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 SEMA4BQ9NPR2 832 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 ABCC13Q9NSE7 274 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 GMIPQ9P107 970 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 NCKAP1Q9Y2A7 1128 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PSME4Q14997 1843 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 A0A1W2PQH9 124 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CAPN14A8MX76 684 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 AP3B1O00203 1094 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CA12O43570 354 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 DCXO43602 365 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 DUSP11O75319 330 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 H2AFYO75367 372 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 LGR5O75473 907 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 RTN3O95197 1032 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 SELPP16109 830 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 AXLP30530 894 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CDH13P55290 713 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PFKFB4Q16877 469 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 SOWAHAQ2M3V2 549 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TEX44Q53QW1 395 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PACS1Q6VY07 963 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 KYAT3Q6YP21 454 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF534Q76KX8 674 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PPTC7Q8NI37 304 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 SCAMP5Q8TAC9 235 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CNDP1Q96KN2 507 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 MARK4Q96L34 752 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TBCDQ9BTW9 1192 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TRIM4Q9C037 500 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CDHR5Q9HBB8 845 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 SEPT3Q9UH03 358 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TEKT2Q9UIF3 430 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 MICAL3Q7RTP6 2002 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PSMD12O00232 456 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 FFAR2O15552 330 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 EPHX1P07099 455 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 ITGA2BP08514 1039 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 VCLP18206 1134 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 SERPINA4P29622 427 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CD151P48509 253 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 GRIK3Q13003 919 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 USP4Q13107 963 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TMED1Q13445 227 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PTPRNQ16849 979 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 MTSS1LQ765P7 747 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CEP68Q76N32 757 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PATL1Q86TB9 770 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 DEFB107AQ8IZN7 70 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PCYOX1LQ8NBM8 494 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CATSPER2Q96P56 530 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 HBEGFQ99075 208 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PRPF18Q99633 342 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TRIM45Q9H8W5 580 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 GKN1Q9NS71 199 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 RIC8BQ9NVN3 520 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CDV3Q9UKY7 258 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PPIEQ9UNP9 301 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 A0A0A0MRY4 1105 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 XPO1O14980 1071 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 BIRC5O15392 142 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 NDUFS2O75306 463 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 GCATO75600 419 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 SORBS2O94875 1100 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 C1RP00736 705 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 C1QAP02745 245 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ALDOAP04075 364 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 VAV1P15498 845 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 CHI3L1P36222 383 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 GPR1P46091 355 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 PIK3CGP48736 1102 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ACLYP53396 1101 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ACTR3P61158 418 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ABCE1P61221 599 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 INCA1Q0VD86 236 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 SEMA5AQ13591 1074 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 PHKG1Q16816 387 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms