RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TRPM6Q9BX84 2022 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 CCDC187A0A096LP49 1063 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 AGRPO00253 132 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 RAD51BO15315 384 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 EFSO43281 561 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 AQP9O43315 295 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 CEP104O60308 925 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 GRAP2O75791 330 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 GJB6O95452 261 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 ADCY5O95622 1261 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 PAK4O96013 591 aaPredicted RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 CSF2P04141 144 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 PRNPP04156 253 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 FAM87AP0C7U9 286 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 SRCP12931 536 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 NME1P15531 152 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 JUNDP17535 347 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 MAN1A1P33908 653 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 SOX5P35711 763 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 STAT1P42224 750 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 SULT1E1P49888 294 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 CSE1LP55060 971 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 ROR2Q01974 943 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 MYL5Q02045 173 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 WASHC5Q12768 1159 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 C1orf61Q13536 156 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 PDE1CQ14123 709 aaPredicted RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 FGL2Q14314 439 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 KRT31Q15323 416 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 ARSIQ5FYB1 569 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 OTUD1Q5VV17 481 aaPredicted RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 LINGO4Q6UY18 593 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 KYAT3Q6YP21 454 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 ATG14Q6ZNE5 492 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 ZNF662Q6ZS27 426 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 ERN2Q76MJ5 926 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 C14orf80Q86SX3 495 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 NOP9Q86U38 636 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 PARGQ86W56 976 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 DCP2Q8IU60 420 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 REXO1L1PQ8IX06 675 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 NEK11Q8NG66 645 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 OR2A12Q8NGT7 310 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 TPCN2Q8NHX9 752 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 TEKT4Q8WW24 435 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 CENPIQ92674 756 aaPredicted RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 ISG20Q96AZ6 181 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 GRAMD1AQ96CP6 724 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 ERGIC2Q96RQ1 377 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 IL12RB2Q99665 862 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 HDAC8Q9BY41 377 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 SLC17A9Q9BYT1 436 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 ZYG11BQ9C0D3 744 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 NAT10Q9H0A0 1025 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 GANQ9H2C0 597 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 TCEAL2Q9H3H9 227 aaPredicted RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 EPB41L5Q9HCM4 733 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 NCKIPSDQ9NZQ3 722 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 C6orf203Q9P0P8 240 aaPredicted RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 KLHL42Q9P2K6 505 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 PCSK1NQ9UHG2 260 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 NOCTQ9UK39 431 aaKnown RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 AJAP1Q9UKB5 411 aaPredicted RBP8.66□□□□□ -1.02
GPC6-202ENST00000617456 HS3ST3A1Q9Y663 406 aa8.66□□□□□ -1.02
GPC6-202ENST00000617456 SPTY2D1-AS1A0A0U1RR47 76 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 LIN7AO14910 233 aaPredicted RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 SMAD6O43541 496 aaKnown RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 LZTS3O60299 673 aaPredicted RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 LEFTY1O75610 366 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 CNTN5O94779 1100 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 CALB1P05937 261 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 RHOCP08134 193 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 ITGA2BP08514 1039 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 UNGP13051 313 aaPredicted RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 OR1E1P30953 314 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 SLC5A2P31639 672 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 HTR7P34969 479 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 ADRA1BP35368 520 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 RECQLP46063 649 aaPredicted RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 RABIFP47224 123 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 MAPKAPK2P49137 400 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 RPIAP49247 311 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 DNA2P51530 1060 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 NEK3P51956 506 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 ADKP55263 362 aaKnown RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 RPS21P63220 83 aaKnown RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 SGCGQ13326 291 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 SPIDRQ14159 915 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 TCEA2Q15560 299 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 TGIF1Q15583 401 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 SEPT7Q16181 437 aaKnown RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 STX1AQ16623 288 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 TMEM259Q4ZIN3 620 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 TPRG1LQ5T0D9 272 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 TLDC1Q6P9B6 456 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 CLEC14AQ86T13 490 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 PHF13Q86YI8 300 aaPredicted RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 SLC35F3Q8IY50 421 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 RBFAQ8N0V3 343 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms