RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 FAM131AQ6UXB0 335 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 ADAMTSL2Q86TH1 951 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 GATAD2AQ86YP4 633 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 TRIM48Q8IWZ4 208 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 MOSPD2Q8NHP6 518 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 NELL1Q92832 810 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 PCDH18Q9HCL0 1135 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 PCDH12Q9NPG4 1184 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 STOML2Q9UJZ1 356 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 ANGPT4Q9Y264 503 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 PCDHB7Q9Y5E2 793 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 LYVE1Q9Y5Y7 322 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 SNCAIPQ9Y6H5 919 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 SH3BGRLO75368 114 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 CYP7B1O75881 506 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 ERBB2P04626 1255 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 FOXN2P32314 431 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 ADGRE1Q14246 886 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 CCNYL2Q5T2Q4 361 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 TRMT11Q7Z4G4 463 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 SPATA19Q7Z5L4 167 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 OR5B17Q8NGF7 314 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 HELQQ8TDG4 1101 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 P2RY11Q96G91 374 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 MFSD14AQ96MC6 490 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 OR52E6Q96RD3 313 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 TUBGCP5Q96RT8 1024 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 HACL1Q9UJ83 578 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 SYNPO2Q9UMS6 1093 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 PCDHB5Q9Y5E4 795 aa10.7□□□□□ -0.7
CLTCL1-209ENST00000617103 KCNU1A8MYU2 1149 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 RFXANKO14593 260 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 BMP10O95393 424 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 CATP04040 527 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ARMC12Q5T9G4 340 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 C10orf82Q8WW14 230 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 MKL1Q969V6 931 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ITCHQ96J02 903 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PANX1Q96RD7 426 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 NLNQ9BYT8 704 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 TMEM138Q9NPI0 162 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 SAMD4AQ9UPU9 718 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 NR2E1Q9Y466 385 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PAPSS1O43252 624 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 BUD23O43709 281 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PLIN3O60664 434 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 SEMA3DO95025 777 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 LRG1P02750 347 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PUDPQ08623 228 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ECM1Q16610 540 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 LY6KQ17RY6 165 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ARHGAP15Q53QZ3 475 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ARL13AQ5H913 290 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 RALGPS1Q5JS13 557 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 VWA5B1Q5TIE3 1220 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 SAMD7Q7Z3H4 446 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 P2RY8Q86VZ1 359 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PIK3C3Q8NEB9 887 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 JOSD2Q8TAC2 188 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 QRFPRQ96P65 431 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 NODALQ96S42 347 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ADI1Q9BV57 179 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ZCCHC2Q9C0B9 1178 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 DDX4Q9NQI0 724 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ABCC13Q9NSE7 274 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 U3KQV3 271 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 CCDC189A1A4V9 331 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 SMIM22K7EJ46 135 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ANGPTL1O95841 491 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 RPLP2P05387 115 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 MTHFRP42898 656 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 AFTPHQ6ULP2 937 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ZC3H7AQ8IWR0 971 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PHACTR4Q8IZ21 702 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 LGI2Q8N0V4 545 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 BANPQ8N9N5 519 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 WDR48Q8TAF3 677 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 TDRD1Q9BXT4 1180 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 SP140LQ9H930 580 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PPRC1Q5VV67 1664 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 BCKDKO14874 412 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 DHX15O43143 795 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 SUV39H1O43463 412 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 SGTAO43765 313 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 IPO13O94829 963 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PTPN1P18031 435 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PPIBP23284 216 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 AXLP30530 894 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 OAZ1P54368 228 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 UGT2B15P54855 530 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 HADHBP55084 474 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 SPIBQ01892 262 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 CARTPTQ16568 116 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 VSTM1Q6UX27 236 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 PIGZQ86VD9 579 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 ZNF410Q86VK4 478 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 TMEM86AQ8N2M4 240 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 GRPEL2Q8TAA5 225 aa10.69□□□□□ -0.7
CLTCL1-209ENST00000617103 LRRN4Q8WUT4 740 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms