RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 SYCP2LQ5T4T6 812 aa21.87■■□□□ 1.09
SNX1-210ENST00000560260 ERAP2Q6P179 960 aa21.87■■□□□ 1.09
SNX1-210ENST00000560260 GSTA5Q7RTV2 222 aa21.87■■□□□ 1.09
SNX1-210ENST00000560260 HORMAD1Q86X24 394 aa21.87■■□□□ 1.09
SNX1-210ENST00000560260 KLK6Q92876 244 aa21.87■■□□□ 1.09
SNX1-210ENST00000560260 SCRN2Q96FV2 425 aa21.87■■□□□ 1.09
SNX1-210ENST00000560260 APOL2Q9BQE5 337 aa21.87■■□□□ 1.09
SNX1-210ENST00000560260 ETNK1Q9HBU6 452 aa21.87■■□□□ 1.09
SNX1-210ENST00000560260 PAK5Q9P286 719 aa21.87■■□□□ 1.09
SNX1-210ENST00000560260 RPL26L1Q9UNX3 145 aaKnown RBP21.87■■□□□ 1.09
SNX1-210ENST00000560260 SDK1Q7Z5N4 2213 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 NEMP1O14524 444 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 TSPAN6O43657 245 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 MMP20O60882 483 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 RHOBTB1O94844 696 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 AGTP01019 485 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 TUBB4AP04350 444 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 ITPKAP23677 461 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 MAOBP27338 520 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 VIPR1P32241 457 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 HNF1BP35680 557 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 GRIA4P48058 902 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 EPHB1P54762 984 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 PRPSAP1Q14558 356 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 CNGA3Q16281 694 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 SIRPB2Q5JXA9 342 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 SPDYCQ5MJ68 293 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 LYSMD4Q5XG99 296 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 KIAA1161Q6NSJ0 714 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 NEK5Q6P3R8 708 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 KLHL7Q8IXQ5 586 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 SLC25A41Q8N5S1 370 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 SNX19Q92543 992 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 IFT43Q96FT9 208 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 CDC23Q9UJX2 597 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 COQ6Q9Y2Z9 468 aa21.86■■□□□ 1.09
SNX1-210ENST00000560260 ARIH1Q9Y4X5 557 aaPredicted RBP21.86■■□□□ 1.09
SNX1-210ENST00000560260 IGLON5A6NGN9 336 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 MEI4A8MW99 385 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 ANKRD66B4E2M5 251 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 USP12O75317 370 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 EPN2O95208 641 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 KRT14P02533 472 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 PIRTP0C851 137 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 PTGIRP43119 386 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 VPS41P49754 854 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 C2orf54Q08AI8 447 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 SEMA5AQ13591 1074 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 CDKN3Q16667 212 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 LIPIQ6XZB0 460 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 USP45Q70EL2 814 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 PDCD7Q8N8D1 485 aaKnown RBP21.85■■□□□ 1.09
SNX1-210ENST00000560260 CXorf40AQ8TE69 158 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 DNASE2BQ8WZ79 361 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 FOXJ1Q92949 421 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 RMDN1Q96DB5 314 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 RAB6BQ9NRW1 208 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 AAR2Q9Y312 384 aaKnown RBP21.85■■□□□ 1.09
SNX1-210ENST00000560260 SPO11Q9Y5K1 396 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 FRYLO94915 3013 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 TRPM6Q9BX84 2022 aa21.85■■□□□ 1.09
SNX1-210ENST00000560260 HEXIM1O94992 359 aaKnown RBP21.84■■□□□ 1.09
SNX1-210ENST00000560260 C6P13671 934 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 FDFT1P37268 417 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 LIG3P49916 1009 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 RPS21P63220 83 aaKnown RBP21.84■■□□□ 1.09
SNX1-210ENST00000560260 SLC1A5Q15758 541 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 DENND5AQ6IQ26 1287 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 CRTC1Q6UUV9 634 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 RANBP10Q6VN20 620 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 ZNF572Q7Z3I7 529 aaPredicted RBP21.84■■□□□ 1.09
SNX1-210ENST00000560260 SPATA4Q8NEY3 305 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 C1orf216Q8TAB5 229 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 LYSMD1Q96S90 227 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 FSD1LQ9BXM9 530 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 ADGRE3Q9BY15 652 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 FZD3Q9NPG1 666 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 TMEM74BQ9NUR3 256 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 PCYOX1Q9UHG3 505 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 EIF2B4Q9UI10 523 aaKnown RBP21.84■■□□□ 1.09
SNX1-210ENST00000560260 MRFAP1Q9Y605 127 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 MYLKQ15746 1914 aa21.84■■□□□ 1.09
SNX1-210ENST00000560260 A0A1W2PPC4 97 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 PROB1E7EW31 1015 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 CCDC188H7C350 402 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 WNT9AO14904 365 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 RAD51BO15315 384 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 ECEL1O95672 775 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 AP2A1O95782 977 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 EPOP01588 193 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 CYP2A6P11509 494 aaPredicted RBP21.83■■□□□ 1.09
SNX1-210ENST00000560260 ACTN2P35609 894 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 LMNB2Q03252 620 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 LRRC66Q68CR7 880 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 LAIR1Q6GTX8 287 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 CYP2U1Q7Z449 544 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 SLCO2A1Q92959 643 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 PPP1R2P1Q96PQ5 205 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 MYOCQ99972 504 aa21.83■■□□□ 1.09
SNX1-210ENST00000560260 TBL1YQ9BQ87 522 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms