RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 TCP11X2Q5H9J9 407 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 DGKKQ5KSL6 1271 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 HYIQ5T013 277 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 AGAP9Q5VTM2 703 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 C9orf57Q5W0N0 161 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 PAPD7Q5XG87 772 aaKnown RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CENPPQ6IPU0 288 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CCDC70Q6NSX1 233 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 VITQ6UXI7 678 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 Q6ZNX1 250 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 MED25Q71SY5 747 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CTAGE6Q86UF2 777 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 ARID3BQ8IVW6 561 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CTAGE4Q8IX94 777 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 RHOT2Q8IXI1 618 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 AHI1Q8N157 1196 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 PPM1KQ8N3J5 372 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CSGALNACT2Q8N6G5 542 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CELF5Q8N6W0 485 aaKnown RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 PDILTQ8N807 584 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 GOLGA5Q8TBA6 731 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 FAM71BQ8TC56 605 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 RAD54LQ92698 747 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 DNASE1L2Q92874 299 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CLDN23Q96B33 292 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 RMDN1Q96DB5 314 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 ACCSQ96QU6 501 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 REEP2Q9BRK0 252 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 DDX23Q9BUQ8 820 aaKnown RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 FUT8Q9BYC5 575 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 PARD6BQ9BYG5 372 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 FAM126AQ9BYI3 521 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 SLC29A3Q9BZD2 475 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 FAM107BQ9H098 131 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 KCTD10Q9H3F6 313 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 ASB7Q9H672 318 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 GKN1Q9NS71 199 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 DLGAP2Q9P1A6 1054 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 RNF14Q9UBS8 474 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 AGO2Q9UKV8 859 aaKnown RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CAPN11Q9UMQ6 739 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 L1RE1Q9UN81 338 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 MAGED2Q9UNF1 606 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 SLC8A2Q9UPR5 921 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 DMTF1Q9Y222 760 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 FRMD4BQ9Y2L6 1034 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 YIPF1Q9Y548 306 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 FANCMQ8IYD8 2048 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 USP34Q70CQ2 3546 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 A0A0B4J269 797 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 MTMR11A4FU01 709 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 GOLGA8IPA6NC78 632 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 GOLGA8JA6NMD2 632 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 MARCH11A6NNE9 402 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 SLC38A8A6NNN8 435 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 LGALS16A8MUM7 142 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 KPNA7A9QM74 516 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ANKRD63C9JTQ0 380 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 SPECC1L-ADORA2AF8WAN1 911 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 TULP2O00295 520 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PSMA7O14818 248 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PPEF2O14830 753 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PJA2O43164 708 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ATG13O75143 517 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 GCNT3O95395 438 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 LDHAP00338 332 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 TNNC2P02585 160 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 RPN1P04843 607 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 GAP43P17677 238 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 HNRNPH3P31942 346 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PNPLA4P41247 253 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 CCR2P41597 374 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 STAT6P42226 847 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 LSSP48449 732 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 AARSP49588 968 aaKnown RBP eCLIP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 COPB1P53618 953 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ADKP55263 362 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PER3P56645 1201 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 KRTAP10-11P60412 298 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 RPL10AP62906 217 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 SIM1P81133 766 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 RBP5P82980 135 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 MYL7Q01449 175 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 SMARCB1Q12824 385 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 GRSF1Q12849 480 aaKnown RBP eCLIP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PON2Q15165 354 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ZBTB6Q15916 424 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ITPRIPL2Q3MIP1 535 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 TMEM119Q4V9L6 283 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ZC2HC1CQ53FD0 456 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 HSP90B2PQ58FF3 399 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 BEND6Q5SZJ8 279 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 BROXQ5VW32 411 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 WSCD1Q658N2 575 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 C1orf228Q6PIY5 440 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 LEKR1Q6ZMV7 388 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 TOGARAM2Q6ZUX3 1019 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 STXBP4Q6ZWJ1 553 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF572Q7Z3I7 529 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 TTC30AQ86WT1 665 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms