RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 GALNT3Q14435 633 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 MORF4L2Q15014 288 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 TMEM52BQ4KMG9 183 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 RNASEH2BQ5TBB1 312 aaKnown RBP16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 ARMC3Q5W041 872 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 DENND5AQ6IQ26 1287 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 DPPA4Q7L190 304 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 KDELC2Q7Z4H8 507 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 RAVER1Q8IY67 606 aaKnown RBP16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 NAT8LQ8N9F0 302 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 OR14C36Q8NHC7 312 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 TOE1Q96GM8 510 aaKnown RBP16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 ZSCAN32Q9NX65 697 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 WHRNQ9P202 907 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 ZNF318Q5VUA4 2279 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 PLK4O00444 970 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 NEMP1O14524 444 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 SEMA4FO95754 770 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 SP9P0CG40 484 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 MLNP12872 115 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 VIPR1P32241 457 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 DMWDQ09019 674 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 IZUMO3Q5VZ72 239 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 KIAA1161Q6NSJ0 714 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 PPP1R21Q6ZMI0 780 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 ZBTB44Q8NCP5 570 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 CADM4Q8NFZ8 388 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 SEC14L1Q92503 715 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 FAM129AQ9BZQ8 928 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 XAB2Q9HCS7 855 aaKnown RBP16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 CASS4Q9NQ75 786 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 PCDHGA2Q9Y5H1 932 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 C10orf142B7Z368 130 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 PSMD11O00231 422 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 SPINT1O43278 529 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 USP12O75317 370 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 SLU7O95391 586 aaKnown RBP16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 ACSL1P33121 698 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 HNF1BP35680 557 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 CHRNA4P43681 627 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 RPL21P46778 160 aaKnown RBP16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 FAM193AP78312 1265 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 CAV1Q03135 178 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 CALCOCO2Q13137 446 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 SPARCL1Q14515 664 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 SPDYCQ5MJ68 293 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 LRRC8BQ6P9F7 803 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 FAM124AQ86V42 546 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 SLC25A41Q8N5S1 370 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 DNAAF3Q8N9W5 541 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 GAB3Q8WWW8 586 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 C19orf43Q9BQ61 176 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 CD93Q9NPY3 652 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 B4GALT6Q9UBX8 382 aa16.5■□□□□ 0.23
SPTLC2-203ENST00000554901 PLXND1Q9Y4D7 1925 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 NPIPB15A6NHN6 443 aaPredicted RBP16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 BHMG1C9JSJ3 638 aaPredicted RBP16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 NDUFS2O75306 463 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 HEXIM1O94992 359 aaKnown RBP16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 CTPS1P17812 591 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 NUDT1P36639 197 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 RPS21P63220 83 aaKnown RBP16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 LAMB3Q13751 1172 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 ARHGEF7Q14155 803 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 HIBCHQ6NVY1 386 aaPredicted RBP16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 TRIM69Q86WT6 500 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 OR52K1Q8NGK4 314 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 BRSK1Q8TDC3 778 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 RLN3Q8WXF3 142 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 ASB12Q8WXK4 309 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 APOL2Q9BQE5 337 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 TRIM31Q9BZY9 425 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 KCTD5Q9NXV2 234 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 ANAPC5Q9UJX4 755 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 SNX24Q9Y343 169 aa16.49■□□□□ 0.23
SPTLC2-203ENST00000554901 TBC1D3DA0A087WVF3 549 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TBC1D3IA0A087WXS9 549 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TBC1D3EA0A087X179 549 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TBC1D3KA0A087X1G2 549 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TCRBV7S3A2A0A539 114 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TBC1D3FA6NER0 549 aaPredicted RBP16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TBC1D3LB9A6J9 549 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 RPP40O75818 363 aaKnown RBP16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TMEM63AO94886 807 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 PCDH8O95206 1070 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 ALPIP09923 528 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TBC1D3HP0C7X1 549 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 NPY2RP49146 381 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 CCR5P51681 352 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 MRPS25P82663 173 aaKnown RBP16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 PDE1BQ01064 536 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 RALGDSQ12967 914 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 MSLNQ13421 630 aaPredicted RBP16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 OLIG2Q13516 323 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 SYCP2LQ5T4T6 812 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 ANKRD22Q5VYY1 191 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TBC1D3GQ6DHY5 549 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 TBC1D3CQ6IPX1 549 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 CRTC1Q6UUV9 634 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 LIPIQ6XZB0 460 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms