RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 OR2T34Q8NGX1 318 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 OR2T3Q8NH03 318 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 PHF21BQ96EK2 531 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 RPL10LQ96L21 214 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 NEURL2Q9BR09 285 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 TRIM8Q9BZR9 551 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 MUC3BQ9H195 1237 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 C2orf40Q9H1Z8 148 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 R3HDMLQ9H3Y0 253 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 PRDM5Q9NQX1 630 aaPredicted RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 CHST12Q9NRB3 414 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 RNF19AQ9NV58 838 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 SETD4Q9NVD3 440 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 TUBA8Q9NY65 449 aaPredicted RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 PKD2L2Q9NZM6 624 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 NCKIPSDQ9NZQ3 722 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 WARS2Q9UGM6 360 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 KLF15Q9UIH9 416 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 OAZ3Q9UMX2 235 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 SBF1O95248 1867 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 HCRTO43612 131 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 SNAI1O95863 264 aaPredicted RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 GSTT2P0CG29 244 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 GSTT2BP0CG30 244 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 GABRB3P28472 473 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 EEF1DP29692 281 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 ACADVLP49748 655 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 PSEN2P49810 448 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 SLC12A2P55011 1212 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 CSE1LP55060 971 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 STX1BP61266 288 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 TRAP1Q12931 704 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 CSHL1Q14406 222 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 TMEM132DQ14C87 1099 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 SKIV2LQ15477 1246 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 GEN1Q17RS7 908 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 ZIK1Q3SY52 487 aaPredicted RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 MORN1Q5T089 497 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 ABRAXAS1Q6UWZ7 409 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 AFAP1L2Q8N4X5 818 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 DHRSXQ8N5I4 330 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 ANKFN1Q8N957 763 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 ANKRD52Q8NB46 1076 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 PDZD8Q8NEN9 1154 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 SPPL2BQ8TCT7 592 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 USP33Q8TEY7 942 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 TRIB2Q92519 343 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 CASP10Q92851 521 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 LRCH3Q96II8 777 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 ELMO2Q96JJ3 720 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 HNRNPABQ99729 332 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 MRPL45Q9BRJ2 306 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 SEZ6LQ9BYH1 1024 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 MINDY3Q9H8M7 445 aa5.34□□□□□ -1.55
KDM3B-209ENST00000542866 FBRSL1Q9HCM7 1045 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 EIF2B3Q9NR50 452 aaKnown RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 FBXO9Q9UK97 447 aaPredicted RBP5.34□□□□□ -1.55
KDM3B-209ENST00000542866 DHRS12A0PJE2 317 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 CARNS1A5YM72 827 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 NR5A2O00482 541 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 EI24O14681 340 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 TRIM24O15164 1050 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 SPTLC1O15269 473 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 ZBTB24O43167 697 aaPredicted RBP5.34□□□□□ -1.56
KDM3B-209ENST00000542866 B4GAT1O43505 415 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 GABBR2O75899 941 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 MYF6P23409 242 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 EDNRBP24530 442 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 PSMA4P25789 261 aaKnown RBP5.34□□□□□ -1.56
KDM3B-209ENST00000542866 YWHAQP27348 245 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 HK2P52789 917 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 SNX16P57768 344 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 MPP1Q00013 466 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 CACNB2Q08289 660 aaPredicted RBP5.34□□□□□ -1.56
KDM3B-209ENST00000542866 ZBTB17Q13105 803 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 CAPRIN1Q14444 709 aaKnown RBP5.34□□□□□ -1.56
KDM3B-209ENST00000542866 SQLEQ14534 574 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 INPP5AQ14642 412 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 TARBP2Q15633 366 aaKnown RBP5.34□□□□□ -1.56
KDM3B-209ENST00000542866 GRIK4Q16099 956 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 SMUG1Q53HV7 270 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 C6orf10Q5SRN2 563 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 NIPAL1Q6NVV3 410 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 KDELC2Q7Z4H8 507 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 TMEM135Q86UB9 458 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 DENND6AQ8IWF6 608 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 SLC15A3Q8IY34 581 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 NAT16Q8N8M0 369 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 RDH11Q8TC12 318 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 PXYLP1Q8TE99 480 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 RNF139Q8WU17 664 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 STYXQ8WUJ0 223 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 KIF12Q96FN5 646 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 GPR20Q99678 358 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 C9orf16Q9BUW7 83 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 SLC25A23Q9BV35 468 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.34□□□□□ -1.56
KDM3B-209ENST00000542866 ADNPQ9H2P0 1102 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 SNX25Q9H3E2 840 aa5.34□□□□□ -1.56
KDM3B-209ENST00000542866 FANCEQ9HB96 536 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms