RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CCDC85BQ15834 202 aaPredicted RBP11.84□□□□□ -0.51
VTN-202ENST00000539746 FASTKD1Q53R41 847 aaKnown RBP11.84□□□□□ -0.51
VTN-202ENST00000539746 ZNF776Q68DI1 518 aaPredicted RBP11.84□□□□□ -0.51
VTN-202ENST00000539746 FBXL19Q6PCT2 694 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 DPY19L3Q6ZPD9 716 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 Q6ZVU0 165 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 ZNF534Q76KX8 674 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.84□□□□□ -0.51
VTN-202ENST00000539746 NETO2Q8NC67 525 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 OR2A12Q8NGT7 310 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 RIN3Q8TB24 985 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 ZFYVE19Q96K21 471 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 ATP6V1G3Q96LB4 118 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 LRRC3BQ96PB8 259 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 PLEKHG4BQ96PX9 1271 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 TRIB3Q96RU7 358 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 SH3GL2Q99962 352 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 ZCCHC2Q9C0B9 1178 aaKnown RBP11.84□□□□□ -0.51
VTN-202ENST00000539746 MFSD1Q9H3U5 465 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 ZFYVE1Q9HBF4 777 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 NLE1Q9NVX2 485 aaPredicted RBP11.84□□□□□ -0.51
VTN-202ENST00000539746 NKIRAS1Q9NYS0 192 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 GTSE1Q9NYZ3 720 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 WNT16Q9UBV4 365 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 LIMD1Q9UGP4 676 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 EVLQ9UI08 416 aaPredicted RBP11.84□□□□□ -0.51
VTN-202ENST00000539746 MID2Q9UJV3 735 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 CHKBQ9Y259 395 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 PCDHGC4Q9Y5F7 938 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 DENND4AQ7Z401 1863 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 TLDC2A0PJX2 215 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 UPK3BL1B0FP48 263 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 LOC730098B7Z3J9 87 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 CFAP99D6REC4 459 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 UPK3BL2E5RIL1 263 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 H7C0S8 307 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 SOX1O00570 391 aaPredicted RBP11.83□□□□□ -0.52
VTN-202ENST00000539746 BNIP3LO60238 219 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 FZD6O60353 706 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 USP12O75317 370 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 AVILO75366 819 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 CD160O95971 181 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 MT-CO1P00395 513 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 MT-ND3P03897 115 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 ATXN1LP0C7T5 689 aaKnown RBP11.83□□□□□ -0.52
VTN-202ENST00000539746 C5AR1P21730 350 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 NEK3P51956 506 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 NRLP54845 237 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 ACVR1Q04771 509 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 ENPP2Q13822 863 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 ZNF234Q14588 700 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 TMEM196Q5HYL7 178 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 ATXN7L2Q5T6C5 722 aaPredicted RBP11.83□□□□□ -0.52
VTN-202ENST00000539746 DENND5AQ6IQ26 1287 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 UGT3A1Q6NUS8 523 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 NEPROQ6NW34 567 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 ADGRD1Q6QNK2 874 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 LEKR1Q6ZMV7 388 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 CNTN4Q8IWV2 1026 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 NRSN1Q8IZ57 195 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 GPR150Q8NGU9 434 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 OR6P1Q8NGX9 317 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 MAFAQ8NHW3 353 aaPredicted RBP11.83□□□□□ -0.52
VTN-202ENST00000539746 FAM76AQ8TAV0 307 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 FRS2Q8WU20 508 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 LRRN4Q8WUT4 740 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 SLC44A1Q8WWI5 657 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 ATXN2LQ8WWM7 1075 aaKnown RBP11.83□□□□□ -0.52
VTN-202ENST00000539746 FAM3CQ92520 227 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 EXOC2Q96KP1 924 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 MRGPRX3Q96LB0 322 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 MCCC1Q96RQ3 725 aaPredicted RBP11.83□□□□□ -0.52
VTN-202ENST00000539746 PAFAH2Q99487 392 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 HDAC8Q9BY41 377 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 TNKS2Q9H2K2 1166 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 TMEM245Q9H330 911 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 KDM4CQ9H3R0 1056 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 POLMQ9NP87 494 aaPredicted RBP11.83□□□□□ -0.52
VTN-202ENST00000539746 BCCIPQ9P287 314 aaKnown RBP eCLIP11.83□□□□□ -0.52
VTN-202ENST00000539746 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 DUSP12Q9UNI6 340 aa11.83□□□□□ -0.52
VTN-202ENST00000539746 C2orf16Q68DN1 1984 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 CHD5Q8TDI0 1954 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 C1orf232A0A0U1RR37 186 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 F5H423 210 aaPredicted RBP11.82□□□□□ -0.52
VTN-202ENST00000539746 POC1B-GALNT4F8VUJ3 575 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 KPNA3O00505 521 aaPredicted RBP11.82□□□□□ -0.52
VTN-202ENST00000539746 NRG2O14511 850 aaPredicted RBP11.82□□□□□ -0.52
VTN-202ENST00000539746 NEMP1O14524 444 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 TRAFD1O14545 582 aaPredicted RBP11.82□□□□□ -0.52
VTN-202ENST00000539746 MUSKO15146 869 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 SMAD6O43541 496 aaKnown RBP11.82□□□□□ -0.52
VTN-202ENST00000539746 TSPAN6O43657 245 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 SIN3BO75182 1162 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 DNTTP04053 509 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 UGT2B4P06133 528 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 APOA4P06727 396 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 ACADMP11310 421 aa11.82□□□□□ -0.52
VTN-202ENST00000539746 PSMA3P25788 255 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms