RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 TBC1D3KA0A087X1G2 549 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 TBC1D3FA6NER0 549 aaPredicted RBP21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 CAPN8A6NHC0 703 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 TBC1D3LB9A6J9 549 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 DLL1O00548 723 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 AREL1O15033 823 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 SEC31AO94979 1220 aaKnown RBP21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 HEXIM1O94992 359 aaKnown RBP21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 PCDH8O95206 1070 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 CRTAMO95727 393 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 TBC1D3HP0C7X1 549 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 RPS21P63220 83 aaKnown RBP21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 GALNT3Q14435 633 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 IHHQ14623 411 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 ANGPT1Q15389 498 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 TMEM52BQ4KMG9 183 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 SPDYCQ5MJ68 293 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 RNASEH2BQ5TBB1 312 aaKnown RBP21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 TBC1D3GQ6DHY5 549 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 TBC1D3CQ6IPX1 549 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 LRRC8BQ6P9F7 803 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 DPPA4Q7L190 304 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 IFT20Q8IY31 132 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 TBC1D3Q8IZP1 549 aaPredicted RBP21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 NOA1Q8NC60 698 aaKnown RBP21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 CADM4Q8NFZ8 388 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 CXorf40AQ8TE69 158 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 NSMCE3Q96MG7 304 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 C19orf43Q9BQ61 176 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 C1QTNF7Q9BXJ2 289 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 TPSD1Q9BZJ3 242 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 FOXP3Q9BZS1 431 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 TSPYL1Q9H0U9 437 aa21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 WSB2Q9NYS7 404 aaPredicted RBP21.2■□□□□ 0.98
PTP4A2-215ENST00000533408 MAGEB16A2A368 324 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 C2orf81A6NN90 581 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 PSMD11O00231 422 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 SEMA4FO95754 770 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 ATXN1LP0C7T5 689 aaKnown RBP21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 TDGF1P13385 188 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 IVDP26440 423 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 HNF1BP35680 557 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 PXNP49023 591 aaPredicted RBP21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 ADPRHP54922 357 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 GUCY2DQ02846 1103 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 SPARCL1Q14515 664 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 MAP7D1Q3KQU3 841 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 ZDHHC20Q5W0Z9 365 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 NLRP9Q7RTR0 991 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 FAM124AQ86V42 546 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 PDIK1LQ8N165 341 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 NAT8LQ8N9F0 302 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 BRSK1Q8TDC3 778 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 FOXJ1Q92949 421 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 TOE1Q96GM8 510 aaKnown RBP21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 IL22Q9GZX6 179 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 CDH19Q9H159 772 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 CASS4Q9NQ75 786 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 SNX24Q9Y343 169 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 PCDHGA2Q9Y5H1 932 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 ATG2BQ96BY7 2078 aa21.19■□□□□ 0.98
PTP4A2-215ENST00000533408 RGSL1A5PLK6 1076 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 PPFIA2O75334 1257 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 MMP12P39900 470 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 RPL21P46778 160 aaKnown RBP21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 FNTBP49356 437 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 SGCGQ13326 291 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 DNAJC21Q5F1R6 531 aaKnown RBP21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 HIBCHQ6NVY1 386 aaPredicted RBP21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 ZC3H14Q6PJT7 736 aaKnown RBP21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 TSSK4Q6SA08 328 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 ZSWIM9Q86XI8 627 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 MAML2Q8IZL2 1156 aaPredicted RBP21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 UBXN4Q92575 508 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 RUBCNQ92622 972 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 NELL1Q92832 810 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 LRFN3Q9BTN0 628 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 GPR63Q9BZJ6 419 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 DPH5Q9H2P9 285 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 ZFYVE1Q9HBF4 777 aa21.18■□□□□ 0.98
PTP4A2-215ENST00000533408 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.18■□□□□ 0.985e-6■□□□□ 10.7
PTP4A2-215ENST00000533408 IGHV1OR15-9A0A0B4J2B8 117 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 USP12O75317 370 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 RPP40O75818 363 aaKnown RBP21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 ELFN1P0C7U0 828 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 SP9P0CG40 484 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 CTPS1P17812 591 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 ABL2P42684 1182 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 CCR5P51681 352 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 METAP1P53582 386 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 ITGA8P53708 1063 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 SLC7A5Q01650 507 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 CUL1Q13616 776 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 FAM182AQ5T1J6 154 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 TRIM69Q86WT6 500 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 OR52K1Q8NGK4 314 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 PTCD2Q8WV60 388 aaKnown RBP21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 GAB3Q8WWW8 586 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 ASB12Q8WXK4 309 aa21.17■□□□□ 0.98
PTP4A2-215ENST00000533408 SEC14L1Q92503 715 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms