RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ZNF182P17025 639 aaPredicted RBP4.04□□□□□ -1.76
SKP1-212ENST00000523966 NAGAP17050 411 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 ITGAXP20702 1163 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 SCP2P22307 547 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 BDNFP23560 247 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 GPTP24298 496 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 CHATP28329 748 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 DCTDP32321 178 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 PIK3CAP42336 1068 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 EFNA5P52803 228 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 SELENOVP59797 346 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 NIPAL4Q0D2K0 466 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 GRIK3Q13003 919 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 WTAPQ15007 396 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 FAM205BPQ63HN1 556 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 ZNF367Q7RTV3 350 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 TICAM1Q8IUC6 712 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 ARHGAP12Q8IWW6 846 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 MIGA1Q8NAN2 632 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 BEST2Q8NFU1 509 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 SGCDQ92629 289 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 INPP5DQ92835 1189 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 PABPC5Q96DU9 382 aaKnown RBP4.04□□□□□ -1.76
SKP1-212ENST00000523966 SLITRK1Q96PX8 696 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 NUDT16L1Q9BRJ7 211 aaKnown RBP4.04□□□□□ -1.76
SKP1-212ENST00000523966 MMTAG2Q9BU76 263 aaKnown RBP4.04□□□□□ -1.76
SKP1-212ENST00000523966 SF3B5Q9BWJ5 86 aaKnown RBP4.04□□□□□ -1.76
SKP1-212ENST00000523966 MAK16Q9BXY0 300 aaKnown RBP4.04□□□□□ -1.76
SKP1-212ENST00000523966 RBM38Q9H0Z9 239 aaKnown RBP4.04□□□□□ -1.76
SKP1-212ENST00000523966 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 NSMCE4AQ9NXX6 385 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 PLK2Q9NYY3 685 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 CISD1Q9NZ45 108 aaKnown RBP4.04□□□□□ -1.76
SKP1-212ENST00000523966 ZNF215Q9UL58 517 aaPredicted RBP4.04□□□□□ -1.76
SKP1-212ENST00000523966 GPR34Q9UPC5 381 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 ZNF521Q96K83 1311 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 A0A0U1RQF3 1178 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 DYTNA2CJ06 578 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 TAF4O00268 1085 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 MOSPD3O75425 235 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 PSG1P11464 419 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 IL7RP16871 459 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 AGAP20933 346 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 SHMT1P34896 483 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 ZNF81P51508 661 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 TFAP4Q01664 338 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 MC1RQ01726 317 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 CHAF1BQ13112 559 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 NAE1Q13564 534 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 CUL4AQ13619 759 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 SHBQ15464 509 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 TWIST1Q15672 202 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 NAB2Q15742 525 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 KRT24Q2M2I5 525 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 USP41Q3LFD5 358 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 C6orf141Q5SZD1 244 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 ASPHD1Q5U4P2 390 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 LINGO2Q7L985 606 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 PIP4P1Q86T03 277 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 TAGAPQ8N103 731 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 ZBTB2Q8N680 514 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 NRACQ8N912 160 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 HUS1BQ8NHY5 278 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 TRIB2Q92519 343 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 MOAP1Q96BY2 351 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 MMABQ96EY8 250 aaPredicted RBP4.03□□□□□ -1.76
SKP1-212ENST00000523966 PERPQ96FX8 193 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 CALML4Q96GE6 196 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 APOLD1Q96LR9 279 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 TMEM47Q9BQJ4 181 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 GLIS2Q9BZE0 524 aaPredicted RBP4.03□□□□□ -1.76
SKP1-212ENST00000523966 GHITMQ9H3K2 345 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 NDST4Q9H3R1 872 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 RANGRFQ9HD47 186 aaPredicted RBP4.03□□□□□ -1.76
SKP1-212ENST00000523966 GPR108Q9NPR9 543 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 TMEM51Q9NW97 253 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 SLCO3A1Q9UIG8 710 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 FZD10Q9ULW2 581 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 RABGAP1Q9Y3P9 1069 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 CEPT1Q9Y6K0 416 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 SESN1Q9Y6P5 492 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 MAU2Q9Y6X3 613 aa4.03□□□□□ -1.76
SKP1-212ENST00000523966 RSF1Q96T23 1441 aaPredicted RBP4.03□□□□□ -1.76
SKP1-212ENST00000523966 FAM237AA0A1B0GTK4 181 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 A0A1B0GVM2 712 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 MYMKA6NI61 221 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 PRSS47A8MTI9 375 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 B4DGG1 531 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 VILLO15195 856 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 NKX2-2O95096 273 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 MLYCDO95822 493 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 CLTBP09497 229 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 HOXD3P31249 432 aaPredicted RBP4.02□□□□□ -1.77
SKP1-212ENST00000523966 RPL3P39023 403 aaKnown RBP4.02□□□□□ -1.77
SKP1-212ENST00000523966 NR4A2P43354 598 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 CXCR3P49682 368 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 F2RL1P55085 397 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 ROR2Q01974 943 aaKnown RBP4.02□□□□□ -1.77
SKP1-212ENST00000523966 LRMPQ12912 555 aa4.02□□□□□ -1.77
SKP1-212ENST00000523966 LAMB3Q13751 1172 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms