RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ABCG4Q9H172 646 aa6.15□□□□□ -1.42
PABPC1-207ENST00000518716 CNGB3Q9NQW8 809 aa6.15□□□□□ -1.42
PABPC1-207ENST00000518716 GPN3Q9UHW5 284 aaPredicted RBP6.15□□□□□ -1.42
PABPC1-207ENST00000518716 CNOT6Q9ULM6 557 aaKnown RBP6.15□□□□□ -1.42
PABPC1-207ENST00000518716 ZFR2Q9UPR6 939 aaKnown RBP6.15□□□□□ -1.42
PABPC1-207ENST00000518716 TRAF3IP3Q9Y228 551 aa6.15□□□□□ -1.42
PABPC1-207ENST00000518716 MAN2B2Q9Y2E5 1009 aa6.15□□□□□ -1.42
PABPC1-207ENST00000518716 OR51B4Q9Y5P0 310 aa6.15□□□□□ -1.42
PABPC1-207ENST00000518716 HS3ST3A1Q9Y663 406 aa6.15□□□□□ -1.42
PABPC1-207ENST00000518716 POLQO75417 2590 aa6.15□□□□□ -1.42
PABPC1-207ENST00000518716 UTP20O75691 2785 aaKnown RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 ZFHX3Q15911 3703 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CCDC187A0A096LP49 1063 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 SPTY2D1-AS1A0A0U1RR47 76 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 A0A1W2PQU0 124 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 RNF103O00237 685 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 O00370 1275 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 TPP1O14773 563 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 ALOX15BO15296 676 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 NVLO15381 856 aaKnown RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 SLC31A1O15431 190 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 PPP6R2O75170 966 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 SLITRK5O94991 958 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 GJB6O95452 261 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 IGLV3-25P01717 112 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CTSLP07711 333 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 ALPPL2P10696 532 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 PRLRP16471 622 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 TRIM21P19474 475 aaKnown RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 SLC5A2P31639 672 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 GTF2H1P32780 548 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 PIK3CAP42336 1068 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 VAMP7P51809 220 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 TBX4P57082 545 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CLDN2P57739 230 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 HNRNPKP61978 463 aaKnown RBP eCLIP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CEBPZQ03701 1054 aaKnown RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CUL4AQ13619 759 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CUL4BQ13620 913 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 SLC12A1Q13621 1099 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 MORC3Q14149 939 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 FGL2Q14314 439 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CLCA4Q14CN2 919 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 TGIF1Q15583 401 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CDKN3Q16667 212 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 ZSCAN23Q3MJ62 389 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 POM121L1PQ3SYA9 428 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 TPRG1LQ5T0D9 272 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 FAM46CQ5VWP2 391 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CXorf57Q6NSI4 855 aaKnown RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 PMF1Q6P1K2 205 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 Q6ZSR6 202 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 EFL1Q7Z2Z2 1120 aaKnown RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 HORMAD1Q86X24 394 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 DCP2Q8IU60 420 aaKnown RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CFAP52Q8N1V2 620 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 ARL14Q8N4G2 192 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CARNMT1Q8N4J0 409 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 TTC39CQ8N584 583 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 UBR7Q8N806 425 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 IQUBQ8NA54 791 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 ZNF548Q8NEK5 533 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 HTR3CQ8WXA8 447 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 IRGQQ8WZA9 623 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 DHX58Q96C10 678 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 EEF2KMTQ96G04 330 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 MYCBPQ99417 103 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 PRMT1Q99873 361 aaKnown RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 ZSWIM1Q9BR11 485 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 FUCA2Q9BTY2 467 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 SLC25A18Q9H1K4 315 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 BLZF1Q9H2G9 400 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 MAGEF1Q9HAY2 307 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 SP110Q9HB58 689 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 LRRC4Q9HBW1 653 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 GCM1Q9NP62 436 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 NCKIPSDQ9NZQ3 722 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 XPO7Q9UIA9 1087 aaKnown RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 TSPAN16Q9UKR8 245 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 KCTD3Q9Y597 815 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-207ENST00000518716 CAPN6Q9Y6Q1 641 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 HIVEP3Q5T1R4 2406 aa6.14□□□□□ -1.43
PABPC1-207ENST00000518716 POM121BA6NF01 834 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 KCNU1A8MYU2 1149 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 PLD2O14939 933 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 RAD51BO15315 384 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 GCATO75600 419 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 TRIM49P0CI25 452 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 TRIM49CP0CI26 452 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 SYT1P21579 422 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 HNRNPA2B1P22626 353 aaKnown RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 UGT1A5P35504 534 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 SULT2A1Q06520 285 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 BST2Q10589 180 aaKnown RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 EIF2B5Q13144 721 aaKnown RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 CDH18Q13634 790 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 SSPNQ14714 243 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 GOLGA7BQ2TAP0 167 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 HS1BP3Q53T59 392 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms