RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 AMFRQ9UKV5 643 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 HS3ST3A1Q9Y663 406 aa14.05□□□□□ -0.16
DDX41-212ENST00000511040 A0A0U1RQS6 177 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 GOLGA6L3A6NEY3 463 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 DFNA5O60443 496 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 PCCBP05166 539 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 ITGAVP06756 1048 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 ALPIP09923 528 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 CEACAM1P13688 526 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 TGM2P21980 687 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 CD86P42081 329 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 NR2C2P49116 596 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 ARRB1P49407 418 aaPredicted RBP14.04□□□□□ -0.16
DDX41-212ENST00000511040 PEX5P50542 639 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 RWDD2BP57060 319 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 SIM1P81133 766 aaPredicted RBP14.04□□□□□ -0.16
DDX41-212ENST00000511040 BNIP3Q12983 259 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 ZNF211Q13398 564 aaPredicted RBP14.04□□□□□ -0.16
DDX41-212ENST00000511040 SUZ12Q15022 739 aaKnown RBP14.04□□□□□ -0.16
DDX41-212ENST00000511040 PRKD1Q15139 912 aaPredicted RBP14.04□□□□□ -0.16
DDX41-212ENST00000511040 PPP2R5EQ16537 467 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 WSCD2Q2TBF2 565 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 CCDC181Q5TID7 509 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 DENND2CQ68D51 928 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 LRRC8AQ8IWT6 810 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 RHBDD1Q8TEB9 315 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 TFB1MQ8WVM0 346 aaKnown RBP14.04□□□□□ -0.16
DDX41-212ENST00000511040 P3H4Q92791 437 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 C10orf88Q9H8K7 445 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 ERVMER34-1Q9H9K5 563 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 HAUS2Q9NVX0 235 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 PCOLCE2Q9UKZ9 415 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 PHTF1Q9UMS5 762 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 GUCA1BQ9UMX6 200 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 CHKBQ9Y259 395 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 PCDHGB2Q9Y5G2 931 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 CAPN6Q9Y6Q1 641 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 CABIN1Q9Y6J0 2220 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 CNOT1A5YKK6 2376 aaKnown RBP14.04□□□□□ -0.16
DDX41-212ENST00000511040 SPTBN2O15020 2390 aa14.04□□□□□ -0.16
DDX41-212ENST00000511040 CCDC66A2RUB6 948 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 NPIPB15A6NHN6 443 aaPredicted RBP14.03□□□□□ -0.16
DDX41-212ENST00000511040 FLRT2O43155 660 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 ARHGAP6O43182 974 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 PCDHGA12O60330 932 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 RECQL5O94762 991 aaPredicted RBP14.03□□□□□ -0.16
DDX41-212ENST00000511040 MMP2P08253 660 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 ELFN1P0C7U0 828 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 PYGMP11217 842 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 EPHA8P29322 1005 aaPredicted RBP14.03□□□□□ -0.16
DDX41-212ENST00000511040 VIPR1P32241 457 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 RABIFP47224 123 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 CCZ1BP86790 482 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 CCZ1P86791 482 aaPredicted RBP14.03□□□□□ -0.16
DDX41-212ENST00000511040 PDE1CQ14123 709 aaPredicted RBP14.03□□□□□ -0.16
DDX41-212ENST00000511040 FZD2Q14332 565 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 LRRC14Q15048 493 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 ACOX1Q15067 660 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 TRIP6Q15654 476 aaKnown RBP14.03□□□□□ -0.16
DDX41-212ENST00000511040 ALG1LQ6GMV1 187 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 LIPIQ6XZB0 460 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 BBS12Q6ZW61 710 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 TSPAN33Q86UF1 283 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 SYCE1Q8N0S2 351 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 CCDC112Q8NEF3 446 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 DENND6BQ8NEG7 585 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 SAP25Q8TEE9 199 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 PIH1D2Q8WWB5 315 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 FAM118BQ9BPY3 351 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 OSBPL8Q9BZF1 889 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 DNAJC28Q9NX36 388 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 AMACRQ9UHK6 382 aa14.03□□□□□ -0.16
DDX41-212ENST00000511040 PCNX2A6NKB5 2137 aa14.02□□□□□ -0.16
DDX41-212ENST00000511040 A0A1W2PQ67 120 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 F5H423 210 aaPredicted RBP14.02□□□□□ -0.17
DDX41-212ENST00000511040 CBFA2T3O75081 653 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 GM2AP17900 193 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 LHCGRP22888 699 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 CES1P23141 567 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 PTPN3P26045 913 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 HNF1BP35680 557 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 RXRGP48443 463 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 EPHB1P54762 984 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 PFN3P60673 137 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 COPS2P61201 443 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 SKOR1P84550 965 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 CNGA3Q16281 694 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 DBX2Q6ZNG2 339 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 BZW1Q7L1Q6 419 aaKnown RBP14.02□□□□□ -0.17
DDX41-212ENST00000511040 KDELC2Q7Z4H8 507 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 HSD11B1LQ7Z5J1 315 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 OXR1Q8N573 874 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 EID2Q8N6I1 236 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 PLA2G15Q8NCC3 412 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 LPCAT1Q8NF37 534 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 RBM15Q96T37 977 aaKnown RBP eCLIP14.02□□□□□ -0.17
DDX41-212ENST00000511040 TDRD1Q9BXT4 1180 aaKnown RBP14.02□□□□□ -0.17
DDX41-212ENST00000511040 TSGA10Q9BZW7 698 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 BRD8Q9H0E9 1235 aa14.02□□□□□ -0.17
DDX41-212ENST00000511040 GPR27Q9NS67 375 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms