RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TMEM259Q4ZIN3 620 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 LRRC73Q5JTD7 316 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 WDR45BQ5MNZ6 344 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 SYCP2LQ5T4T6 812 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 LYSMD4Q5XG99 296 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 KIAA1161Q6NSJ0 714 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 ERAP2Q6P179 960 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 KDELC1Q6UW63 502 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 ARHGEF18Q6ZSZ5 1173 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 HORMAD1Q86X24 394 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 NDUFAF2Q8N183 169 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 ATL2Q8NHH9 583 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 MAGOHBQ96A72 148 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 SCRN2Q96FV2 425 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 OXNAD1Q96HP4 312 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 MCCC1Q96RQ3 725 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 TRIB3Q96RU7 358 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 GORASP1Q9BQQ3 440 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 AP1M1Q9BXS5 423 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 ADGRE3Q9BY15 652 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 SMARCAL1Q9NZC9 954 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 AAR2Q9Y312 384 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 PCDHGA5Q9Y5G8 931 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 PLXNB3Q9ULL4 1909 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 USP34Q70CQ2 3546 aa11.97□□□□□ -0.49
PDLIM5-208ENST00000504489 PIKFYVEQ9Y2I7 2098 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 LRP4O75096 1905 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 EP300Q09472 2414 aaPredicted RBP11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 A0A0J9YYE9 177 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 GOLGA6L10A0A0M3HER8 536 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 LOC285095A0A1B0GVY8 99 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 A0A1W2PQU0 124 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 PRR23AA6NEV1 266 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 MEI4A8MW99 385 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 ANKRD66B4E2M5 251 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 NEMP1O14524 444 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 PHF2O75151 1096 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 PMPCBO75439 489 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 FSBPO95073 299 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 EPN2O95208 641 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 NDST3O95803 873 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 TRBC1P01850 177 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 RETP07949 1114 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 ITIH2P19823 946 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 CD27P26842 260 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 PSMB4P28070 264 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 HOXD12P35452 270 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 ACTN2P35609 894 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 COILP38432 576 aaPredicted RBP11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 PAFAH1B1P43034 410 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 KCNJ1P48048 391 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 GRIA4P48058 902 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 WNT3AP56704 352 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 PPP2CBP62714 309 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 PPP2CAP67775 309 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 RALGDSQ12967 914 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 LPAL2Q16609 132 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 ZNF284Q2VY69 593 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 C4orf22Q6V702 233 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 DPPA4Q7L190 304 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 CCDC89Q8N998 374 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 ASB12Q8WXK4 309 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 IFT43Q96FT9 208 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 CAPZA3Q96KX2 299 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 MRGPRX2Q96LB1 330 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 ORAI3Q9BRQ5 295 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 UBP1Q9NZI7 540 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 FEZ2Q9UHY8 353 aaPredicted RBP11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 GGT7Q9UJ14 662 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 PILRBQ9UKJ0 227 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 ZFR2Q9UPR6 939 aaKnown RBP11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 ITM2BQ9Y287 266 aa11.96□□□□□ -0.49
PDLIM5-208ENST00000504489 A0A1W2PPC4 97 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 GOLGA6CA6NDK9 693 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 GOLGA6BA6NDN3 693 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 PDE2AO00408 941 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 PSMD3O43242 534 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 METTL18O95568 372 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 IFNB1P01574 187 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 PRKCGP05129 697 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 GOLGA6DP0CG33 693 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 CYP2A6P11509 494 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 ITPKAP23677 461 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 VIPR1P32241 457 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 FDFT1P37268 417 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 FNTAP49354 379 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 EPHB1P54762 984 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 FAM193AP78312 1265 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 PCSK7Q16549 785 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 QPCTQ16769 361 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 SETMARQ53H47 684 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 PEAR1Q5VY43 1037 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 SEL1L3Q68CR1 1132 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 CCDC70Q6NSX1 233 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 TTC27Q6P3X3 843 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 LIPIQ6XZB0 460 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 USP45Q70EL2 814 aa11.95□□□□□ -0.5
PDLIM5-208ENST00000504489 ARMCX6Q7L4S7 300 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms