RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CHRM1P11229 460 aaPredicted RBP12.74□□□□□ -0.37
CLIC4-202ENST00000488683 APLP1P51693 650 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 YWHAHQ04917 246 aaPredicted RBP12.74□□□□□ -0.37
CLIC4-202ENST00000488683 PTK2BQ14289 1009 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 HECTD2Q5U5R9 776 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 KIAA0930Q6ICG6 404 aaPredicted RBP12.74□□□□□ -0.37
CLIC4-202ENST00000488683 CYHR1Q6ZMK1 362 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 DIS3LQ8TF46 1054 aaKnown RBP12.74□□□□□ -0.37
CLIC4-202ENST00000488683 TRIB2Q92519 343 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 LRGUKQ96M69 825 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 PHF12Q96QT6 1004 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 OCEL1Q9H607 264 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 FESP07332 822 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 CDKN1CP49918 316 aaPredicted RBP12.73□□□□□ -0.37
CLIC4-202ENST00000488683 TUSC3Q13454 348 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 GEN1Q17RS7 908 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 LIN52Q52LA3 116 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 TECRLQ5HYJ1 363 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 SIRPB2Q5JXA9 342 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 UGT2A3Q6UWM9 527 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 C17orf99Q6UX52 265 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 C16orf89Q6UX73 402 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 MAELQ96JY0 434 aaKnown RBP12.73□□□□□ -0.37
CLIC4-202ENST00000488683 NSMCE3Q96MG7 304 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 MRPL57Q9BQC6 102 aaKnown RBP12.73□□□□□ -0.37
CLIC4-202ENST00000488683 UBE2OQ9C0C9 1292 aaKnown RBP12.73□□□□□ -0.37
CLIC4-202ENST00000488683 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 PDP2Q9P2J9 529 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 VTI1BQ9UEU0 232 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
CLIC4-202ENST00000488683 PCDHGA7Q9Y5G6 932 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 A0A0D9SEW6 157 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 A0A0U1RQF3 1178 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 PRORSD1PA6NEY8 169 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 CCDC160A6NGH7 325 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 TPST1O60507 370 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 ZNF623O75123 536 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 ELNP15502 786 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 PRKAA2P54646 552 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 CAPRIN1Q14444 709 aaKnown RBP12.73□□□□□ -0.37
CLIC4-202ENST00000488683 MS4A13Q5J8X5 152 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 OGFRL1Q5TC84 451 aaPredicted RBP12.73□□□□□ -0.37
CLIC4-202ENST00000488683 BEND5Q7L4P6 421 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 LCA5Q86VQ0 697 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 LZTR1Q8N653 840 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 UPF1Q92900 1129 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■□□□ 12.6
CLIC4-202ENST00000488683 CCDC28BQ9BUN5 200 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 TRIM4Q9C037 500 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 GRIP2Q9C0E4 1043 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 PIF1Q9H611 641 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 MRM3Q9HC36 420 aaKnown RBP12.73□□□□□ -0.37
CLIC4-202ENST00000488683 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.73□□□□□ -0.37
CLIC4-202ENST00000488683 RIMS3Q9UJD0 308 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 IKZF3Q9UKT9 509 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 PSMD13Q9UNM6 376 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 FAM50BQ9Y247 325 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 AP4B1Q9Y6B7 739 aa12.73□□□□□ -0.37
CLIC4-202ENST00000488683 CROCCQ5TZA2 2017 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 FAM149AA5PLN7 773 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 GOLGA8CPA6NN73 597 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 UBXN8O00124 270 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 CCND3P30281 292 aaPredicted RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 MLLT6P55198 1093 aaPredicted RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 PSME3P61289 254 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 TSPY1Q01534 308 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 FASTKQ14296 549 aaKnown RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 DSC3Q14574 896 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 FAM83EQ2M2I3 478 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 RTN4RL1Q86UN2 441 aaPredicted RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 APLFQ8IW19 511 aaPredicted RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 CCDC117Q8IWD4 279 aaPredicted RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 PGAM4Q8N0Y7 254 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 PELI3Q8N2H9 469 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 METTL25Q8N6Q8 603 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 PRPF18Q99633 342 aaKnown RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 SP110Q9HB58 689 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 GALPQ9UBC7 116 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 EGFL7Q9UHF1 273 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 HEMK1Q9Y5R4 338 aaPredicted RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 H3BMM5 538 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 NPHS1O60500 1241 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 ALDOCP09972 364 aaKnown RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 ME2P23368 584 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 ATP5F1P24539 256 aaPredicted RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 HK2P52789 917 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 POU4F1Q01851 419 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 GRB7Q14451 532 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 CYTH1Q15438 398 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 KCNA10Q16322 511 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 REP15Q6BDI9 236 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 TIGD7Q6NT04 549 aaPredicted RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 FBXL22Q6P050 247 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 ZNF549Q6P9A3 640 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 ZNF683Q8IZ20 524 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 GIPC2Q8TF65 315 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 PDCD6IPQ8WUM4 868 aaKnown RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 PTCD2Q8WV60 388 aaKnown RBP12.72□□□□□ -0.37
CLIC4-202ENST00000488683 SUSD3Q96L08 255 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 ZNF512Q96ME7 567 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms