RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 UCMAQ8WVF2 138 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 SYT11Q9BT88 431 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 FAM126AQ9BYI3 521 aaPredicted RBP14.39□□□□□ -0.11
COL20A1-206ENST00000479501 SEMA6AQ9H2E6 1030 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 TRIM45Q9H8W5 580 aaPredicted RBP14.39□□□□□ -0.11
COL20A1-206ENST00000479501 OPTCQ9UBM4 332 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 CNTN6Q9UQ52 1028 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 TEX264Q9Y6I9 313 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 TBL1XO60907 577 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 SEC22BO75396 215 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 WFS1O76024 890 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 OR56A5P0C7T3 313 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 HNRNPDQ14103 355 aaKnown RBP14.39□□□□□ -0.11
COL20A1-206ENST00000479501 PARP15Q460N3 678 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 RHBDF2Q6PJF5 856 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 AZIN2Q96A70 460 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 TRMOQ9BU70 441 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 CDV3Q9UKY7 258 aaKnown RBP14.39□□□□□ -0.11
COL20A1-206ENST00000479501 PCDHB9Q9Y5E1 797 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 BTAF1O14981 1849 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 KCNU1A8MYU2 1149 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 PRR23D1E9PI22 279 aaPredicted RBP14.39□□□□□ -0.11
COL20A1-206ENST00000479501 MFN2O95140 757 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 FAM163BP0C2L3 166 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 PRR23D2P0DMB1 279 aaPredicted RBP14.39□□□□□ -0.11
COL20A1-206ENST00000479501 DGKAP23743 735 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 PSMB9P28065 219 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 PBLDP30039 288 aaPredicted RBP14.39□□□□□ -0.11
COL20A1-206ENST00000479501 CCDC142Q17RM4 750 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 ZNF618Q5T7W0 954 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 RNF220Q5VTB9 566 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 TAPT1Q6NXT6 567 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 RELL1Q8IUW5 271 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 CLYBLQ8N0X4 340 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 RTL3Q8N8U3 475 aaKnown RBP14.39□□□□□ -0.11
COL20A1-206ENST00000479501 MCOLN3Q8TDD5 553 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 TCAF1Q9Y4C2 921 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 TOGARAM1Q9Y4F4 1720 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 PLCH1Q4KWH8 1693 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 H3BMM5 538 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 PRIM2P49643 509 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 MPP1Q00013 466 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 ITGADQ13349 1161 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 BLMHQ13867 455 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 ARL13AQ5H913 290 aaPredicted RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 GSTCDQ8NEC7 633 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 TSPAN14Q8NG11 270 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 KCTD13Q8WZ19 329 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 MAGED4Q96JG8 741 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 BDH2Q9BUT1 245 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 GATA5Q9BWX5 397 aaPredicted RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 ITGB1BP2Q9UKP3 347 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 C15orf38-AP3S2A0A0A6YYH1 394 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 CXorf49A8MYA2 514 aaPredicted RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 LDLRP01130 860 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 MSH3P20585 1137 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 SOAT1P35610 550 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 NEK3P51956 506 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 ATP6V0D1P61421 351 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 POLR2LP62875 67 aaKnown RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 DSC2Q02487 901 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 METTL21CQ5VZV1 264 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 KIAA0408Q6ZU52 694 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 HFE2Q6ZVN8 426 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 ARPINQ7Z6K5 226 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 TMEM159Q96B96 161 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 AGAP2Q99490 1192 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 NOL6Q9H6R4 1146 aaKnown RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 ACSS2Q9NR19 701 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 GTF2IRD1Q9UHL9 959 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 MGAT4DA6NG13 374 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 CLDN11O75508 207 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 CYP2A7P20853 494 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 TKTP29401 623 aaKnown RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 SLC5A9Q2M3M2 681 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 VARS2Q5ST30 1063 aaKnown RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 RSBN1Q5VWQ0 802 aaPredicted RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 DNAJC14Q6Y2X3 702 aaPredicted RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 MYO5AQ9Y4I1 1855 aaKnown RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 DDX60Q8IY21 1712 aaKnown RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 MARF1Q9Y4F3 1742 aaKnown RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 MGRN1O60291 552 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 SIN3BO75182 1162 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 HGFP14210 728 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 SELPP16109 830 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 CES1P23141 567 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 SOX6P35712 828 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 MAPK8P45983 427 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 TRIM25Q14258 630 aaKnown RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 RBM44Q6ZP01 1051 aaKnown RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 OSTM1Q86WC4 334 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 BBS7Q8IWZ6 715 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 PQLC3Q8N755 202 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 SPATA16Q9BXB7 569 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 CEP44Q9C0F1 390 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 DENND2DQ9H6A0 471 aaPredicted RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 ARL15Q9NXU5 204 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 PNMA8BQ9ULN7 279 aaPredicted RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 ZMYND8Q9ULU4 1186 aaPredicted RBP14.38□□□□□ -0.11
COL20A1-206ENST00000479501 Q9Y3F1 56 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms