RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CD93Q9NPY3 652 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 ZSCAN32Q9NX65 697 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 CACNA1IQ9P0X4 2223 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 NDUFS2O75306 463 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 USP12O75317 370 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 SEC31AO94979 1220 aaKnown RBP15.27■□□□□ 0.04
SNIP1-202ENST00000468040 SEMA4FO95754 770 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 SP9P0CG40 484 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 CTPS1P17812 591 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 IVDP26440 423 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 VIPR1P32241 457 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 ACSL1P33121 698 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 CNR2P34972 360 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 MMP12P39900 470 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 TUBB4BP68371 445 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 MRPS25P82663 173 aaKnown RBP15.27■□□□□ 0.04
SNIP1-202ENST00000468040 CDH17Q12864 832 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 MORF4L2Q15014 288 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 RNASEH2BQ5TBB1 312 aaKnown RBP15.27■□□□□ 0.04
SNIP1-202ENST00000468040 DPPA4Q7L190 304 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 NAT8LQ8N9F0 302 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 DNAAF3Q8N9W5 541 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 MCUQ8NE86 351 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 OR2T34Q8NGX1 318 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 TRIM31Q9BZY9 425 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 PCED1AQ9H1Q7 454 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 TRABDQ9H4I3 376 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 MAGEE1Q9HCI5 957 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 WSB2Q9NYS7 404 aaPredicted RBP15.27■□□□□ 0.04
SNIP1-202ENST00000468040 HACD3Q9P035 362 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 B4GALT6Q9UBX8 382 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 SHOC2Q9UQ13 582 aa15.27■□□□□ 0.04
SNIP1-202ENST00000468040 PLXND1Q9Y4D7 1925 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 NPIPB15A6NHN6 443 aaPredicted RBP15.26■□□□□ 0.03
SNIP1-202ENST00000468040 H0Y858 1186 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 SPINT1O43278 529 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 HEXIM1O94992 359 aaKnown RBP15.26■□□□□ 0.03
SNIP1-202ENST00000468040 PCDH8O95206 1070 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 SLU7O95391 586 aaKnown RBP15.26■□□□□ 0.03
SNIP1-202ENST00000468040 PRKCGP05129 697 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 ALPIP09923 528 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 ZNF30P17039 623 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 ITIH2P19823 946 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 HNF1BP35680 557 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 RPL21P46778 160 aaKnown RBP15.26■□□□□ 0.03
SNIP1-202ENST00000468040 TERF1P54274 439 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 DRG2P55039 364 aaKnown RBP15.26■□□□□ 0.03
SNIP1-202ENST00000468040 CALCOCO2Q13137 446 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 OLIG2Q13516 323 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 ARHGEF7Q14155 803 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 TMEM52BQ4KMG9 183 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 DUPD1Q68J44 220 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 DENND5AQ6IQ26 1287 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 KIAA1161Q6NSJ0 714 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 CXorf40AQ8TE69 158 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 GAB3Q8WWW8 586 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 FRMD8Q9BZ67 464 aaPredicted RBP15.26■□□□□ 0.03
SNIP1-202ENST00000468040 XAB2Q9HCS7 855 aaKnown RBP15.26■□□□□ 0.03
SNIP1-202ENST00000468040 CASS4Q9NQ75 786 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 WHRNQ9P202 907 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 ITM2BQ9Y287 266 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 SNX24Q9Y343 169 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 PCDHGA2Q9Y5H1 932 aa15.26■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3DA0A087WVF3 549 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3IA0A087WXS9 549 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3EA0A087X179 549 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3KA0A087X1G2 549 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 C1orf232A0A0U1RR37 186 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TCRBV7S3A2A0A539 114 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3FA6NER0 549 aaPredicted RBP15.25■□□□□ 0.03
SNIP1-202ENST00000468040 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3LB9A6J9 549 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 MAP3K13O43283 966 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 RPP40O75818 363 aaKnown RBP15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TMEM63AO94886 807 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 ELFN1P0C7U0 828 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3HP0C7X1 549 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 MLNP12872 115 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 RPS21P63220 83 aaKnown RBP15.25■□□□□ 0.03
SNIP1-202ENST00000468040 SLC7A5Q01650 507 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 RALGDSQ12967 914 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 ANKRD22Q5VYY1 191 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3GQ6DHY5 549 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3CQ6IPX1 549 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 HIBCHQ6NVY1 386 aaPredicted RBP15.25■□□□□ 0.03
SNIP1-202ENST00000468040 LRRC8BQ6P9F7 803 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 TBC1D3Q8IZP1 549 aaPredicted RBP15.25■□□□□ 0.03
SNIP1-202ENST00000468040 FAM160A2Q8N612 972 aaPredicted RBP15.25■□□□□ 0.03
SNIP1-202ENST00000468040 ZBTB44Q8NCP5 570 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 CADM4Q8NFZ8 388 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 OR52K1Q8NGK4 314 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 GPR174Q9BXC1 333 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 DPH5Q9H2P9 285 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 ANAPC5Q9UJX4 755 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 INVSQ9Y283 1065 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 ZNF711Q9Y462 761 aa15.25■□□□□ 0.03
SNIP1-202ENST00000468040 PRR23AA6NEV1 266 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 PSMD11O00231 422 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 RNGTTO60942 597 aaKnown RBP15.24■□□□□ 0.03
SNIP1-202ENST00000468040 LHCGRP22888 699 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms