RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 GDAQ9Y2T3 454 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 NFE2L3Q9Y4A8 694 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 A3GALT2U3KPV4 340 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 ERI2A8K979 691 aaKnown RBP5.01□□□□□ -1.61
SMC4-205ENST00000465563 WEE2P0C1S8 567 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 VEGFAP15692 232 aaPredicted RBP5.01□□□□□ -1.61
SMC4-205ENST00000465563 ITGAXP20702 1163 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 ITGADQ13349 1161 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 FCN2Q15485 313 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 B3GNT6Q6ZMB0 384 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 MOB3CQ70IA8 216 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 DSG4Q86SJ6 1040 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 METTL27Q8N6F8 245 aaPredicted RBP5.01□□□□□ -1.61
SMC4-205ENST00000465563 KXD1Q9BQD3 176 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 C17orf75Q9HAS0 396 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 CISD1Q9NZ45 108 aaKnown RBP5.01□□□□□ -1.61
SMC4-205ENST00000465563 C1RLQ9NZP8 487 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 DNAJC16Q9Y2G8 782 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 RRP7AQ9Y3A4 280 aaKnown RBP5.01□□□□□ -1.61
SMC4-205ENST00000465563 PSAT1Q9Y617 370 aa5.01□□□□□ -1.61
SMC4-205ENST00000465563 ASPDHA6ND91 283 aa5□□□□□ -1.61
SMC4-205ENST00000465563 RNF224P0DH78 156 aa5□□□□□ -1.61
SMC4-205ENST00000465563 RXRAP19793 462 aa5□□□□□ -1.61
SMC4-205ENST00000465563 SLC20A2Q08357 652 aa5□□□□□ -1.61
SMC4-205ENST00000465563 GRAPLQ8TC17 118 aaPredicted RBP5□□□□□ -1.61
SMC4-205ENST00000465563 CLSTN3Q9BQT9 956 aa5□□□□□ -1.61
SMC4-205ENST00000465563 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5□□□□□ -1.61
SMC4-205ENST00000465563 EGLN1Q9GZT9 426 aa5□□□□□ -1.61
SMC4-205ENST00000465563 SLC32A1Q9H598 525 aa5□□□□□ -1.61
SMC4-205ENST00000465563 STN1Q9H668 368 aaKnown RBP5□□□□□ -1.61
SMC4-205ENST00000465563 ZNF696Q9H7X3 374 aa5□□□□□ -1.61
SMC4-205ENST00000465563 KLHL1Q9NR64 748 aa5□□□□□ -1.61
SMC4-205ENST00000465563 SMYD2Q9NRG4 433 aa5□□□□□ -1.61
SMC4-205ENST00000465563 TAAR2Q9P1P5 351 aa5□□□□□ -1.61
SMC4-205ENST00000465563 CDH1P12830 882 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 SLC2A4P14672 509 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 FMO5P49326 533 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 RELQ04864 619 aaPredicted RBP4.99□□□□□ -1.61
SMC4-205ENST00000465563 TRIM14Q14142 442 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 C14orf177Q52M58 125 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 NFE4Q86UQ8 179 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 MAGEC3Q8TD91 643 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 TRAPPC12Q8WVT3 735 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 GFRA4Q9GZZ7 299 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 EPHX3Q9H6B9 360 aa4.99□□□□□ -1.61
SMC4-205ENST00000465563 LILRA5A6NI73 299 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 CAPN9O14815 690 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 PER2O15055 1255 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 FGF5P12034 268 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 LINC01547P58512 204 aaPredicted RBP4.98□□□□□ -1.61
SMC4-205ENST00000465563 PRKG1Q13976 671 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 C17orf99Q6UX52 265 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 ODF3L1Q8IXM7 274 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 SCCPDHQ8NBX0 429 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 VPS37AQ8NEZ2 397 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 CEP70Q8NHQ1 597 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 CD180Q99467 661 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 FAM167BQ9BTA0 163 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 PCDH9Q9HC56 1237 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 CNGB3Q9NQW8 809 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 RASSF1Q9NS23 344 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 MCM9Q9NXL9 1143 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 DDX43Q9NXZ2 648 aaKnown RBP4.98□□□□□ -1.61
SMC4-205ENST00000465563 DAAM1Q9Y4D1 1078 aa4.98□□□□□ -1.61
SMC4-205ENST00000465563 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 PABPN1LA6NDY0 278 aaKnown RBP4.97□□□□□ -1.61
SMC4-205ENST00000465563 FAM90A7PA6NKC0 464 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 SH2D7A6NKC9 451 aaPredicted RBP4.97□□□□□ -1.61
SMC4-205ENST00000465563 FAM90A22PA8MWA6 464 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 FAM90A12PA8MX19 464 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 FAM90A23PA8MXZ1 464 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 AKR1B15C9JRZ8 316 aaPredicted RBP4.97□□□□□ -1.61
SMC4-205ENST00000465563 PEX12O00623 359 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 KLK8O60259 260 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 PRSS1P07477 247 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 HMGB1P09429 215 aaKnown RBP4.97□□□□□ -1.61
SMC4-205ENST00000465563 HLA-DOBP13765 273 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 CD53P19397 219 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
SMC4-205ENST00000465563 PITX1P78337 314 aaPredicted RBP4.97□□□□□ -1.61
SMC4-205ENST00000465563 CCDC174Q6PII3 467 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 DGLUCYQ7Z3D6 616 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 MOGAT3Q86VF5 341 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 KIAA2013Q8IYS2 634 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 ZNF485Q8NCK3 441 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 AGBL3Q8NEM8 1001 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 RND1Q92730 232 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 ZNF501Q96CX3 271 aaPredicted RBP4.97□□□□□ -1.61
SMC4-205ENST00000465563 CDCA5Q96FF9 252 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 TWNKQ96RR1 684 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 MXRA8Q9BRK3 442 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 RBM4Q9BWF3 364 aaKnown RBP4.97□□□□□ -1.61
SMC4-205ENST00000465563 CSTL1Q9H114 145 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 PLEKHA5Q9HAU0 1116 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 NOD2Q9HC29 1040 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 CARD8Q9Y2G2 431 aa4.97□□□□□ -1.61
SMC4-205ENST00000465563 PDS5AQ29RF7 1337 aaKnown RBP4.97□□□□□ -1.61
SMC4-205ENST00000465563 TMPOP42166 694 aaKnown RBP4.96□□□□□ -1.62
SMC4-205ENST00000465563 CLDN2P57739 230 aa4.96□□□□□ -1.62
SMC4-205ENST00000465563 PMP22Q01453 160 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms