RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 TRIT1Q9H3H1 467 aaKnown RBP9.7□□□□□ -0.86
NIPSNAP1-204ENST00000455496 TCEAL2Q9H3H9 227 aaPredicted RBP9.7□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SYNCQ9H7C4 482 aa9.7□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CNGB3Q9NQW8 809 aa9.7□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SLC39A1Q9NY26 324 aa9.7□□□□□ -0.86
NIPSNAP1-204ENST00000455496 STIM2Q9P246 746 aa9.7□□□□□ -0.86
NIPSNAP1-204ENST00000455496 GPR34Q9UPC5 381 aa9.7□□□□□ -0.86
NIPSNAP1-204ENST00000455496 USP3Q9Y6I4 520 aa9.7□□□□□ -0.86
NIPSNAP1-204ENST00000455496 TACC2O95359 2948 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 FAM170AA1A519 330 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 ALOX15BO15296 676 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SPINT1O43278 529 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SART1O43290 800 aaKnown RBP9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 ZBED1O96006 694 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PAK4O96013 591 aaPredicted RBP9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 VAV1P15498 845 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 TNFAIP3P21580 790 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 NOP2P46087 812 aaKnown RBP9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 NSFP46459 744 aaKnown RBP9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 RPL34P49207 117 aaKnown RBP9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 BLKP51451 505 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 THOP1P52888 689 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SNX16P57768 344 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 RAB15P59190 212 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CDH18Q13634 790 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CLEC16AQ2KHT3 1053 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PTPN20Q4JDL3 420 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 HGSNATQ68CP4 663 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SEL1L3Q68CR1 1132 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PPP1R2P3Q6NXS1 205 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 JMJD6Q6NYC1 403 aaPredicted RBP9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 RFWD3Q6PCD5 774 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SPRED1Q7Z699 444 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CDH24Q86UP0 819 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SCML4Q8N228 414 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CARNMT1Q8N4J0 409 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 WDTC1Q8N5D0 677 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 TC2NQ8N9U0 490 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 GLIS1Q8NBF1 620 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SPC24Q8NBT2 197 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 AGBL5Q8NDL9 886 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PCDH19Q8TAB3 1148 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CPA5Q8WXQ8 436 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CPXM1Q96SM3 734 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PCDHB18PQ96TA0 734 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 MDFIQ99750 246 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 TMUB1Q9BVT8 246 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 MIS12Q9H081 205 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 DEF6Q9H4E7 631 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 MRPL40Q9NQ50 206 aaKnown RBP9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 IMPACTQ9P2X3 320 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 HBS1LQ9Y450 684 aaKnown RBP9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 NBEAL1Q6ZS30 2694 aa9.69□□□□□ -0.86
NIPSNAP1-204ENST00000455496 TMEM200CA6NKL6 621 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 HAX1O00165 279 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 MCF2LO15068 1137 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PRICKLE3O43900 615 aaPredicted RBP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 GABBR2O75899 941 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CPNE6O95741 557 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 ERBB2P04626 1255 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PLEKP08567 350 aaPredicted RBP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 UNGP13051 313 aaPredicted RBP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 COX6B1P14854 86 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 BPIP17213 487 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CSTF2P33240 577 aaKnown RBP eCLIP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 MAN1A1P33908 653 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 DAOAP59103 153 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 YWHAGP61981 247 aaKnown RBP eCLIP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 RPS21P63220 83 aaKnown RBP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PPARDQ03181 441 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CENPCQ03188 943 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 TRA2AQ13595 282 aaKnown RBP eCLIP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 ARHGEF7Q14155 803 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 GSE1Q14687 1217 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 TMEM259Q4ZIN3 620 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PM20D1Q6GTS8 502 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 WDR59Q6PJI9 974 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 FAM183BPQ6ZVS7 135 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 BHLHA9Q7RTU4 235 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 TMEM110Q86TL2 294 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 GKN2Q86XP6 184 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 APLFQ8IW19 511 aaPredicted RBP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 NRSN1Q8IZ57 195 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 RCBTB1Q8NDN9 531 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CLEC4CQ8WTT0 213 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 FRS2Q8WU20 508 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 IRGQQ8WZA9 623 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 ANP32BQ92688 251 aaKnown RBP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 FAM149B1Q96BN6 582 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 C11orf70Q9BRQ4 267 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SLC25A23Q9BV35 468 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 DYRK4Q9NR20 520 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 OLA1Q9NTK5 396 aaKnown RBP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 CROTQ9UKG9 612 aa9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PCDHGA9Q9Y5G4 932 aaKnown RBP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 KLF2Q9Y5W3 355 aaPredicted RBP9.68□□□□□ -0.86
NIPSNAP1-204ENST00000455496 POLEQ07864 2286 aa9.67□□□□□ -0.86
NIPSNAP1-204ENST00000455496 PKDREJQ9NTG1 2253 aa9.67□□□□□ -0.86
NIPSNAP1-204ENST00000455496 SSU72P8A0A1W2PR75 194 aa9.67□□□□□ -0.86
NIPSNAP1-204ENST00000455496 YJEFN3A6XGL0 299 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms