RNA–Protein interactions for RNA: ENST00000433627.9

LSM14A-201, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LSM14A, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-201ENST00000433627 TMEM175Q9BSA9 504 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 VN1R3Q9BXE9 311 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 IGSF5Q9NSI5 407 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 STOML1Q9UBI4 398 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 PLA2G4CQ9UP65 541 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 SORCS3Q9UPU3 1222 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 CDYLQ9Y232 598 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 PCDHGC4Q9Y5F7 938 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 PRRC2BQ5JSZ5 2229 aaKnown RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 MATN2O00339 956 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 ATP5BP06576 529 aaKnown RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 LTA4HP09960 611 aaKnown RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 COX4I1P13073 169 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 HOXD9P28356 352 aaPredicted RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 PTPRRQ15256 657 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 TCHHL1Q5QJ38 904 aaPredicted RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 KIAA0408Q6ZU52 694 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 SNX32Q86XE0 403 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 CCDC117Q8IWD4 279 aaPredicted RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 TSPAN17Q96FV3 270 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 PRICKLE1Q96MT3 831 aaPredicted RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 RNF38Q9H0F5 515 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 NCKIPSDQ9NZQ3 722 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 MTRRQ9UBK8 725 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 SEPT3Q9UH03 358 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 ATP11BQ9Y2G3 1177 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 GREB1Q4ZG55 1949 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 COL4A4P53420 1690 aaPredicted RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 CD3EAPO15446 510 aaKnown RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 CFLARO15519 480 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 ZDHHC11BP0C7U3 371 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 MBL2P11226 248 aaPredicted RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 SMARCB1Q12824 385 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 ARHGEF6Q15052 776 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 TRIM60Q495X7 471 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 RNF219Q5W0B1 726 aaPredicted RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 LSMEM2Q8N112 164 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 CARNMT1Q8N4J0 409 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 TMEM169Q96HH4 297 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 PANX3Q96QZ0 392 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 CLSTN3Q9BQT9 956 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 MMADHCQ9H3L0 296 aaPredicted RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
LSM14A-201ENST00000433627 TSR3Q9UJK0 312 aaKnown RBP13.78□□□□□ -0.2
LSM14A-201ENST00000433627 SLC7A4O43246 635 aa13.77□□□□□ -0.2
LSM14A-201ENST00000433627 SNAP91O60641 907 aa13.77□□□□□ -0.2
LSM14A-201ENST00000433627 MAGEC1O60732 1142 aa13.77□□□□□ -0.2
LSM14A-201ENST00000433627 TBX10O75333 385 aa13.77□□□□□ -0.2
LSM14A-201ENST00000433627 S1PR4O95977 384 aa13.77□□□□□ -0.2
LSM14A-201ENST00000433627 ALOX15P16050 662 aaPredicted RBP13.77□□□□□ -0.2
LSM14A-201ENST00000433627 GNAZP19086 355 aa13.77□□□□□ -0.2
LSM14A-201ENST00000433627 ATP5F1P24539 256 aaPredicted RBP13.77□□□□□ -0.2
LSM14A-201ENST00000433627 LEPRP48357 1165 aaKnown RBP13.77□□□□□ -0.2
LSM14A-201ENST00000433627 NUDT2P50583 147 aa13.77□□□□□ -0.2
LSM14A-201ENST00000433627 GEN1Q17RS7 908 aa13.77□□□□□ -0.2
LSM14A-201ENST00000433627 IGSF21Q96ID5 467 aa13.77□□□□□ -0.2
LSM14A-201ENST00000433627 GRID2O43424 1007 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 STC2O76061 302 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 FGF1P05230 155 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 HLA-DPA1P20036 260 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 ELF1P32519 619 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 FBXO48Q5FWF7 155 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 MFSD1Q9H3U5 465 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 BPIFA1Q9NP55 256 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 FAM50BQ9Y247 325 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 YIPF1Q9Y548 306 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 PLXNA3P51805 1871 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 LOC285095A0A1B0GVY8 99 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 A8MT66 165 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 TARM1B6A8C7 271 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 SUPT7LO94864 414 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 MYL4P12829 197 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 CPOXP36551 454 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 SEMA3AQ14563 771 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 SLC8B1Q6J4K2 584 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 GLT6D1Q7Z4J2 308 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
LSM14A-201ENST00000433627 ENDOVQ8N8Q3 282 aaKnown RBP13.77□□□□□ -0.21
LSM14A-201ENST00000433627 SNX31Q8N9S9 440 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 OR4K2Q8NGD2 314 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
LSM14A-201ENST00000433627 FEM1CQ96JP0 617 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 MAGEH1Q9H213 219 aa13.77□□□□□ -0.21
LSM14A-201ENST00000433627 RPL26L1Q9UNX3 145 aaKnown RBP13.77□□□□□ -0.21
LSM14A-201ENST00000433627 MROH6A6NGR9 719 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 GNRH1P01148 92 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 PDHA1P08559 390 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 PIK3R1P27986 724 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 ATXN3P54252 364 aaPredicted RBP13.76□□□□□ -0.21
LSM14A-201ENST00000433627 CDH4P55283 916 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 TWF1Q12792 350 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 VEPH1Q14D04 833 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 ZRSR2Q15696 482 aaKnown RBP13.76□□□□□ -0.21
LSM14A-201ENST00000433627 TECRLQ5HYJ1 363 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 MRNIPQ6NTE8 343 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 RANBP9Q96S59 729 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 CATSPERZQ9NTU4 200 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 A0A088AWK7 358 aa13.76□□□□□ -0.21
LSM14A-201ENST00000433627 H0Y626 953 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms