RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PTPN18Q99952 460 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 TLR10Q9BXR5 811 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 H2AFXP16104 143 aaPredicted RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 RAB10P61026 200 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 GRB14Q14449 540 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 GK5Q6ZS86 529 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 PIGZQ86VD9 579 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 KATNAL2Q8IYT4 538 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 NXF3Q9H4D5 531 aaKnown RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 CCDC182A6NF36 153 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 KRT36O76013 467 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 RPL22P35268 128 aaKnown RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 DUSP4Q13115 394 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 NR1D2Q14995 579 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 CERCAMQ5T4B2 595 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 OTOP3Q7RTS5 596 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 GHDCQ8N2G8 530 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 OR52E6Q96RD3 313 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 ACO2Q99798 780 aaKnown RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 TTLL2Q9BWV7 592 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 TMEM216Q9P0N5 145 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 PCDHB9Q9Y5E1 797 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 ENPP3O14638 875 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 ETS2P15036 469 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 CDH13P55290 713 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 RPL7AP62424 266 aaKnown RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 CBX2Q14781 532 aaPredicted RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 APOBEC3HQ6NTF7 200 aaKnown RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 DCBLD1Q8N8Z6 715 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 BLOC1S4Q9NUP1 217 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 COMMD9Q9P000 198 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 AGO1Q9UL18 857 aaKnown RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 MTF2Q9Y483 593 aaPredicted RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 FGF10O15520 208 aaPredicted RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 ADCY6O43306 1168 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 SLC35G4P0C7Q5 338 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 RXRGP48443 463 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 PUDPQ08623 228 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 CBFBQ13951 182 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 DLG2Q15700 870 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 C12orf50Q8NA57 414 aaPredicted RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 LENG1Q96BZ8 264 aaPredicted RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 RCN3Q96D15 328 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 ART5Q96L15 291 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 SLC38A2Q96QD8 506 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 CFAP97Q9P2B7 532 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 PSMD13Q9UNM6 376 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 SIGLEC16A6NMB1 481 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 MATN4O95460 622 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 PTCHD4Q6ZW05 846 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 UBE2R2Q712K3 238 aaPredicted RBP18.21■□□□□ 0.51
SNX27-202ENST00000368841 OR5B17Q8NGF7 314 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 ATXN2LQ8WWM7 1075 aaKnown RBP18.21■□□□□ 0.51
SNX27-202ENST00000368841 CHADO15335 359 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 C9P02748 559 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 ITGA1P56199 1179 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 SF1Q15637 639 aaKnown RBP18.21■□□□□ 0.51
SNX27-202ENST00000368841 IQSEC1Q6DN90 963 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 KRT74Q7RTS7 529 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 KPNA5O15131 536 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 MANFP55145 182 aaKnown RBP18.21■□□□□ 0.51
SNX27-202ENST00000368841 RALGPS2Q86X27 583 aaPredicted RBP18.21■□□□□ 0.51
SNX27-202ENST00000368841 DEFB118Q96PH6 123 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 SAMHD1Q9Y3Z3 626 aaKnown RBP18.21■□□□□ 0.51
SNX27-202ENST00000368841 FOXO6A8MYZ6 492 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 C9JVG2 144 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 SLC28A1O00337 649 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 FTH1P02794 183 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 EFNA1P20827 205 aaPredicted RBP18.21■□□□□ 0.51
SNX27-202ENST00000368841 CXCR3P49682 368 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 SEMG2Q02383 582 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 GCNT1Q02742 428 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 CMC1Q7Z7K0 106 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 ABCB9Q9NP78 766 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 SNX10Q9Y5X0 201 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 NCOA3Q9Y6Q9 1424 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 CCNA2P20248 432 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.21■□□□□ 0.51
SNX27-202ENST00000368841 KYAT3Q6YP21 454 aaKnown RBP18.21■□□□□ 0.51
SNX27-202ENST00000368841 CLIP4Q8N3C7 705 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 POC5Q8NA72 575 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 QRFPRQ96P65 431 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 GAL3ST1Q99999 423 aa18.21■□□□□ 0.51
SNX27-202ENST00000368841 ATP4AP20648 1035 aa18.21■□□□□ 0.5
SNX27-202ENST00000368841 ELF3P78545 371 aaPredicted RBP18.21■□□□□ 0.5
SNX27-202ENST00000368841 SMAD3P84022 425 aaKnown RBP18.21■□□□□ 0.5
SNX27-202ENST00000368841 GFOD2Q3B7J2 385 aa18.21■□□□□ 0.5
SNX27-202ENST00000368841 ILDR1Q86SU0 546 aaPredicted RBP18.21■□□□□ 0.5
SNX27-202ENST00000368841 GPC2Q8N158 579 aa18.21■□□□□ 0.5
SNX27-202ENST00000368841 IL31RAQ8NI17 732 aa18.21■□□□□ 0.5
SNX27-202ENST00000368841 CLIC5Q9NZA1 410 aa18.21■□□□□ 0.5
SNX27-202ENST00000368841 ULK1O75385 1050 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 SKP1P63208 163 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 SPIRE1Q08AE8 756 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 C12orf56Q8IXR9 622 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 PRSS58Q8IYP2 241 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 TRIM63Q969Q1 353 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 ASTN1O14525 1302 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 ASTN2O75129 1339 aaPredicted RBP18.2■□□□□ 0.5
SNX27-202ENST00000368841 EPHB6O15197 1021 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms