RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 KATNA1O75449 491 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 IPO13O94829 963 aaKnown RBP14.81□□□□□ -0.04
NUP50-201ENST00000347635 TPP2P29144 1249 aaPredicted RBP14.81□□□□□ -0.04
NUP50-201ENST00000347635 PGS1Q32NB8 556 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 SLC9A4Q6AI14 798 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 METTL6Q8TCB7 284 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 ZFAND2BQ8WV99 257 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 TREHO43280 583 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 SCNN1BP51168 640 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 CCL23P55773 120 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 IRF9Q00978 393 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 OTOP3Q7RTS5 596 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 TREML1Q86YW5 311 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 LRTOMTQ8WZ04 291 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 ADGRE3Q9BY15 652 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 NXF3Q9H4D5 531 aaKnown RBP14.81□□□□□ -0.04
NUP50-201ENST00000347635 GALNT8Q9NY28 637 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 EGFL7Q9UHF1 273 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 BTRCQ9Y297 605 aa14.81□□□□□ -0.04
NUP50-201ENST00000347635 PSMB9P28065 219 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 OR1E1P30953 314 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 GALK1P51570 392 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 TMEM192Q8IY95 271 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 LPCAT1Q8NF37 534 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 ZNF358Q9NW07 568 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 A0A0J9YYE9 177 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 AZIN1O14977 448 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 CKBP12277 381 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 SP2Q02086 613 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 SLC10A6Q3KNW5 377 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 NCBP2-AS2Q69YL0 99 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 VPS37AQ8NEZ2 397 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 PEBP4Q96S96 227 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 RHOBTB2Q9BYZ6 727 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 NHSQ6T4R5 1651 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 NMBRP28336 390 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 EIF2B2P49770 351 aaKnown RBP14.8□□□□□ -0.04
NUP50-201ENST00000347635 EPS8Q12929 822 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 GLT6D1Q7Z4J2 308 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 POLR1EQ9GZS1 481 aaKnown RBP14.8□□□□□ -0.04
NUP50-201ENST00000347635 GLOD4Q9HC38 313 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 FAM50BQ9Y247 325 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 SLC9A3R1O14745 358 aaPredicted RBP14.8□□□□□ -0.04
NUP50-201ENST00000347635 RNASEH1O60930 286 aaKnown RBP14.8□□□□□ -0.04
NUP50-201ENST00000347635 RFPL1O75677 317 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 ADH1AP07327 375 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 CHRNGP07510 517 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 IDO1P14902 403 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 MSH3P20585 1137 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 ARHGAP1Q07960 439 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 CSTF3Q12996 717 aaKnown RBP14.8□□□□□ -0.04
NUP50-201ENST00000347635 TRIM25Q14258 630 aaKnown RBP14.8□□□□□ -0.04
NUP50-201ENST00000347635 RGS21Q2M5E4 152 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 LDLRAD1Q5T700 205 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 FRMD7Q6ZUT3 714 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 FAM35AQ86V20 835 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 LRRC49Q8IUZ0 686 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 CLEC4CQ8WTT0 213 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 RORBQ92753 470 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 DGCR6LQ9BY27 220 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 PALMDQ9NP74 551 aa14.8□□□□□ -0.04
NUP50-201ENST00000347635 TTLL13PA6NNM8 815 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 C22orf31O95567 290 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 EOMESO95936 686 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 MPP1Q00013 466 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 DLG1Q12959 904 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 ITGADQ13349 1161 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 ZNF792Q3KQV3 632 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 SYTL3Q4VX76 610 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 INTS6LQ5JSJ4 861 aaKnown RBP14.79□□□□□ -0.04
NUP50-201ENST00000347635 ZNF554Q86TJ5 538 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 CCDC103Q8IW40 242 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 CARNMT1Q8N4J0 409 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 TBC1D19Q8N5T2 526 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 SETD9Q8NE22 299 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 OR52K2Q8NGK3 314 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 PADI3Q9ULW8 664 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 VWA7Q9Y334 891 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 ARHGEF9O43307 516 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 CCNT2O60583 730 aaKnown RBP14.79□□□□□ -0.04
NUP50-201ENST00000347635 PPIGQ13427 754 aaKnown RBP eCLIP14.79□□□□□ -0.04
NUP50-201ENST00000347635 DLG2Q15700 870 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 ZIK1Q3SY52 487 aaPredicted RBP14.79□□□□□ -0.04
NUP50-201ENST00000347635 IL27RAQ6UWB1 636 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 C19orf60Q96EN9 201 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 HMG20AQ9NP66 347 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 VPS28Q9UK41 221 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 RWDD3Q9Y3V2 267 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 PTGES3LE9PB15 166 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 KCNH1O95259 989 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 LINC00032P0C843 101 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 APLP1P51693 650 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 NR1D2Q14995 579 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 DGUOKQ16854 277 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 SFT2D3Q587I9 215 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 ZCCHC7Q8N3Z6 543 aaKnown RBP14.79□□□□□ -0.04
NUP50-201ENST00000347635 SFRP1Q8N474 314 aa14.79□□□□□ -0.04
NUP50-201ENST00000347635 FSTL5Q8N475 847 aaPredicted RBP14.79□□□□□ -0.04
NUP50-201ENST00000347635 PTCD2Q8WV60 388 aaKnown RBP14.79□□□□□ -0.04
NUP50-201ENST00000347635 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms