RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 PUS10Q3MIT2 529 aaKnown RBP18.23■□□□□ 0.51
PKP3-201ENST00000331563 ZYG11AQ6WRX3 759 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 FAM183BPQ6ZVS7 135 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 EGLN2Q96KS0 407 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 FCRL3Q96P31 734 aaPredicted RBP18.23■□□□□ 0.51
PKP3-201ENST00000331563 IFT80Q9P2H3 777 aaPredicted RBP18.23■□□□□ 0.51
PKP3-201ENST00000331563 TCAF1Q9Y4C2 921 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 ADGRA2Q96PE1 1338 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 DHRS12A0PJE2 317 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 TRPC5OSA6NMA1 111 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 B4GAT1O43505 415 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 PRKACBP22694 351 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 ATP6V0D1P61421 351 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 PTPN11Q06124 597 aaPredicted RBP18.23■□□□□ 0.51
PKP3-201ENST00000331563 CCDC14Q49A88 953 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 INTS11Q5TA45 600 aaKnown RBP18.23■□□□□ 0.51
PKP3-201ENST00000331563 MINDY2Q8NBR6 621 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 ACVR1CQ8NER5 493 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 ABHD11Q8NFV4 315 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 RAB2BQ8WUD1 216 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 ADAMTS10Q9H324 1103 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 VRTNQ9H8Y1 702 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 HMGXB4Q9UGU5 601 aa18.23■□□□□ 0.51
PKP3-201ENST00000331563 RUVBL2Q9Y230 463 aaKnown RBP18.23■□□□□ 0.51
PKP3-201ENST00000331563 USP12O75317 370 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 APOA4P06727 396 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 PSMA4P25789 261 aaKnown RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 SDC4P31431 198 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 TNK2Q07912 1038 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 INPP5AQ14642 412 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 IER5Q5VY09 327 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 HEATR4Q86WZ0 1026 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 PDPRQ8NCN5 879 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 OR13F1Q8NGS4 319 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 TWNKQ96RR1 684 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 MAGEB5Q9BZ81 275 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 MOV10Q9HCE1 1003 aaKnown RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 GBA2Q9HCG7 927 aaPredicted RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 ARMC1Q9NVT9 282 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 A0A0A0MRY4 1105 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 TOR1BO14657 336 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 TNNC2P02585 160 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 SNRPB2P08579 225 aaKnown RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 POLR2IP36954 125 aaKnown RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 SPCS2Q15005 226 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 ZNF667Q5HYK9 610 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 DNAAF3Q8N9W5 541 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 CPB2Q96IY4 423 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 SPATA13Q96N96 652 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 OMDQ99983 421 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 ZNF670Q9BS34 389 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 ING2Q9H160 280 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 TP63Q9H3D4 680 aaPredicted RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 RNF19AQ9NV58 838 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 TRAF6Q9Y4K3 522 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 UBDO15205 165 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 CABYRO75952 493 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 DDHD2O94830 711 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 SNAI1O95863 264 aaPredicted RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 MT-CO1P00395 513 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 LGALS2P05162 132 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 HSPA1AP0DMV8 641 aaKnown RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 HSPA1BP0DMV9 641 aaKnown RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 PSMB4P28070 264 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 CAPGP40121 348 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 GRSF1Q12849 480 aaKnown RBP eCLIP18.22■□□□□ 0.513e-6■■■□□ 15.9
PKP3-201ENST00000331563 CARTPTQ16568 116 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 ZNF792Q3KQV3 632 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 SPANXN3Q5MJ09 141 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 RNF19BQ6ZMZ0 732 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 PIWIL3Q7Z3Z3 882 aaKnown RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 DDIASQ8IXT1 998 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 CCNYQ8ND76 341 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 CXorf38Q8TB03 319 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 SNX19Q92543 992 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 SH3YL1Q96HL8 342 aaPredicted RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 QKIQ96PU8 341 aaKnown RBP eCLIP18.22■□□□□ 0.51
PKP3-201ENST00000331563 TUBA1CQ9BQE3 449 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 MRPL4Q9BYD3 311 aaKnown RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 IL22Q9GZX6 179 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 CD320Q9NPF0 282 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.22■□□□□ 0.51
PKP3-201ENST00000331563 TBC1D14Q9P2M4 693 aa18.22■□□□□ 0.51
PKP3-201ENST00000331563 LAMA2P24043 3122 aaKnown RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 A0A087WZ62 844 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 SDHDO14521 159 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 SOX11P35716 441 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 PSMD8P48556 350 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 MAPK11Q15759 364 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 BTBD8Q5XKL5 378 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 CCSAPQ6IQ19 270 aaPredicted RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 CCDC81Q6ZN84 652 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 PLPPR4Q7Z2D5 763 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 GABPB2Q8TAK5 448 aaPredicted RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 FDXACB1Q9BRP7 624 aaPredicted RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 ADNPQ9H2P0 1102 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 PCDH12Q9NPG4 1184 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 CCM2LQ9NUG4 571 aaPredicted RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 CD300AQ9UGN4 299 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms